| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5169 |
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| Symbol | |
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| ID | 5191363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5809852 |
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| End bp | 5810742 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589652 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001270471 |
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| Protein GI | 148550369 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.569755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0670669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAC GCCTGGTACC CTCCATGACC GCCCTGCAGT GCTTTGAAGC TGCAGCCCGC
CATCTGAGTT TTACCCGTGC CGCCGAAGAA CTGCACCTGA CCCAGAGCGC GGTCAGCAAG
CAGGTGGCGC AGCTGGAAGA CATGCTGCGC CACCACCTGT TCCTGCGCAT CCGCCGGCGC
TTGCAGCTGA CCCCGGCCGG CAGCCTGTAC CTGGCCGAGG TCAACAAAAT CCTCACCCAG
GTGGACATGT CCAGCCGCTA CGTACTCACC TACGGCGAGC AGACCGAGAT ATTGAAGGTA
GCCACTCAAC CGAGTTTTGG CGTGCGCTGG TTGATCCCGC ACCTCAAGGG GTTTGGCAAA
CGACACAGCA ATATCCACCT GGACATTCGC AACGAAATGG AGCCGTTCGC CCTGCTGCAA
GGCTCGGCTG ACGTGGTGTT CTTCTATGGC CAGGGCACCT GGCCGGGGGC CACTTGCGTG
GAGTTGTTTC GCGAAGAGGT GGTGCCGGTG TGTGCGCCAG AGCTGCTGGC CGGGCGCAAG
CTGGCCGGTG CCGAGGAGCT GGCCGAGCTG GTGCTGCTGC AAAGCACCTC GCGCCCGGAG
GCCTGGCATG AGTGGTTCCT GGAGCAGGAC CTGCAGAGCG TCAGCGCCTA CCACGGGCCG
CGCTTCGATA CGTTCTATAT GGCGTTGAGC GCAGCACAGG CCGGGTGCGG GGTAGCGCTG
GTGCCGCGCT ACCTGGCGGC GAAGGAACTG GCCGACGGTA GCCTGGTGGT GCCGTGGAAC
CATGCGATGC GCAGTGCCGG GGCGCACTAT CTGGCGTACG CTGAACATGC GGCGGAGGTG
CCCAAGGTGC GGGCGCTGGT GGAGTGGATC CACGAACAGC TTCAGGCTTG A
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| Protein sequence | MSKRLVPSMT ALQCFEAAAR HLSFTRAAEE LHLTQSAVSK QVAQLEDMLR HHLFLRIRRR
LQLTPAGSLY LAEVNKILTQ VDMSSRYVLT YGEQTEILKV ATQPSFGVRW LIPHLKGFGK
RHSNIHLDIR NEMEPFALLQ GSADVVFFYG QGTWPGATCV ELFREEVVPV CAPELLAGRK
LAGAEELAEL VLLQSTSRPE AWHEWFLEQD LQSVSAYHGP RFDTFYMALS AAQAGCGVAL
VPRYLAAKEL ADGSLVVPWN HAMRSAGAHY LAYAEHAAEV PKVRALVEWI HEQLQA
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