| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5166 |
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| Symbol | |
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| ID | 5193228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5805246 |
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| End bp | 5806673 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589649 |
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| Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
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| Protein accession | YP_001270468 |
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| Protein GI | 148550366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0740457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0860349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGT TCATCCAGTC GTCCCCGTTG TTGCTCGGTT GCGCCCTGAT CCTGCTCGAC
CTCGTGCTTT GGCAACTGAT CCCCATTCAG CGTCATGCCT GGCGCATCAG CGCGCGCCTG
GTGATCTTCC TGCTGTTCAG CGCGGTGCTG ATGGCCGCCG GCATGAGCCC GCTGCAACCA
CCGCCGTGGC CCGACGATCT CTCGCGCAAC CTGATGGCCA CGGTATTGGC CATCGGCTGG
TGGCTGTTCG GTGCGCGCAC GGTGACCGTG GTGTTCGGCC TGTTGCTGGT GGCCCGTGGC
AGCCATGGCG GGCGCTTGCT GCAGGATGTG CTGGGGGCAT TGATCTTCCT CGCCGCCGTG
GTCGCGGCCG CAGGCTACGT GCTGCAACTG CCGGTGAAGG GCCTGCTGGC CACCTCCGGG
GTAATGGCCA TCGTCATCGG CCTGGCGCTG CAGAGCACAC TGGCTGACGT CTTCAGCGGC
ATCGTACTGA ACACCACGCG GCCCTATCAG ATTGGCGACT CAATCTCCAT CGACGGCACC
GAAGGCAAGG TCCTGGACAT CGACTGGCGC GCCACGCGCC TGCTGACCGG TACCGGCAGC
CTGGCGGTGA TCCCCAATTC GGTGGCGGCC AAGGCGCGGC TGCTCAACCA CAGTCGCCCG
GCCGATGTGC ACGGTGTATC GATCAGCGTG GTGGTCCCGG CCAAGGTGCG GCCCAAGCGT
GTGTTCGATG CGCTGGAAAA AGCCTTGCAG GGCGTCAGTG CCATCCTTGC GACCCCGAAG
CCGAAGGTGA CGGTAAAGGC CTCGACTCTC GAGTCGGTGG AGTACGAGGC CAGCGGCTTC
GTGGCCGATG CGGGCACCAA GGGCGATGCA CGTAACCAGT TGTTCGACCT GGCGCACCGG
CATCTGGAGG CCAGCGGGGT GATGTGGAAC GTCGACCTGG CTGTGCCGCC GCGCAGTCGC
CAGCGCGAGG TGCTGGATGA GGTGCGAGTG TTCCGCTCGC TAAGTGATGA AGAGCGCGAT
GCGTTGAGCC AGCGCATGAC TGCAGTCGAG TACCTGGCGG ACCAGGTGAT CCTGGGGGTG
GGCGAGCATT CCGATCATCT GCTGGTGATT GGCAGCGGTG TGGTATCGGC CTCGGTGCGC
GACGGAGACA AGCGGCTGGA GGCCGGGCGC ATGGGGCCGG GAGAGGTGCT GGGGATCGAG
GGGATCATCG ACGACGAAGA CTCGCTGGCC GAATTCCGCA CGCTGACCAG TTGCGTGCTG
TACCGGATCG ACAAGGAACA GGTGAAGAGC TGTTTGCAGC AGCGTGGCGA AGTGCAGACG
GCGTTGAGCA AGTTGCAGCG GTTCCGGCGG CAGAGCCGGG AGTCGTTGTT GCTGCAAAAG
CCGGCCCTGA TCAAGAAAGG TGGCTTCCTC AGCTGGCTGC ACAAGTAA
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| Protein sequence | MLAFIQSSPL LLGCALILLD LVLWQLIPIQ RHAWRISARL VIFLLFSAVL MAAGMSPLQP
PPWPDDLSRN LMATVLAIGW WLFGARTVTV VFGLLLVARG SHGGRLLQDV LGALIFLAAV
VAAAGYVLQL PVKGLLATSG VMAIVIGLAL QSTLADVFSG IVLNTTRPYQ IGDSISIDGT
EGKVLDIDWR ATRLLTGTGS LAVIPNSVAA KARLLNHSRP ADVHGVSISV VVPAKVRPKR
VFDALEKALQ GVSAILATPK PKVTVKASTL ESVEYEASGF VADAGTKGDA RNQLFDLAHR
HLEASGVMWN VDLAVPPRSR QREVLDEVRV FRSLSDEERD ALSQRMTAVE YLADQVILGV
GEHSDHLLVI GSGVVSASVR DGDKRLEAGR MGPGEVLGIE GIIDDEDSLA EFRTLTSCVL
YRIDKEQVKS CLQQRGEVQT ALSKLQRFRR QSRESLLLQK PALIKKGGFL SWLHK
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