Gene Pput_5164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5164 
Symbol 
ID5192683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5803869 
End bp5804177 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID640589647 
Producthypothetical protein 
Protein accessionYP_001270466 
Protein GI148550364 
COG category[S] Function unknown 
COG ID[COG3224] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.23504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0982881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CACTCCATGA CAACCGCGAA GTGGTGACCG TATGCCTGCA ACACAAGGTG 
CTTGATAGCC CGCCGGGCAC CCCCGCAGCG CAACCGCCGC GCTGGAAACA GGCGCTGCTG
ACCTACCTGG TGATCTGCCC GATGACCATG GTCATCCCGC AACTGCTGGC GCCGCTGTTT
GCACGCTTCC CGCAACTGGG CGGCGTGATC ACCGGCAACC TGATCGTCAA CCTGTTCGTC
ATCCTGCCCG TGGTGTTCTA CATCATGCCT TGGGTAACCC GCCGCTGCGC CAACTGGCTG
CGCGGCTGA
 
Protein sequence
MNTALHDNRE VVTVCLQHKV LDSPPGTPAA QPPRWKQALL TYLVICPMTM VIPQLLAPLF 
ARFPQLGGVI TGNLIVNLFV ILPVVFYIMP WVTRRCANWL RG