| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5161 |
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| Symbol | |
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| ID | 5191904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5799102 |
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| End bp | 5800700 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589644 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_001270463 |
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| Protein GI | 148550361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0839068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAT CCCCTTCAGG TGCCTGGAGC CCGTTGCGTA ACACCACCTT CCGCATGCTG
TGGATCGCCA CCATCGCCTC CAACATCGGC ACCTGGATGC ACGAGGTGGG CGCCGGCTGG
CTGATGACCA CGCTGTCGGC CAGCCCGCTG CACGTGGCGT TGATCCAGGT AGCCGGCTCG
TTGCCGATGT TCTTCCTGGC CCTGCCGGCG GGCGCAGCGG CGGACATCGT CGACAAACGC
CGCTACCTGT TGCTGGTGCA ACTGTGGATG TCTTGCGTAG CGGTTGTGCT GGCGGCCCTG
ACCTTGCTCG GGATGATGAA CGTCACCTTG CTGCTGGTGC TGACCCTGGC ACTGGGCATC
GGCACAGCGC TGATGATGCC GGCGTGGAGC GCACTGACAC CGGAACTGGT GGGCAAGGAG
GACCTGGCCG ACGCGGTGGC GCTTTCCAGT GTCGGCATCA ACGTGTCACG GGCCATCGGC
CCGGCACTGG CGGGGGTGGT GGTGAGCATG GTCGGCCCGT GGCTGACCTT TGCCCTGAAT
GCCATCTCGT TTGCGGGTGT GATCCTGGTG TTGTTCCTGT GGAAGCGCGA GGTGAAGGAA
CCACTGCTGC CGGCCGAACG CTTCGTTGGC GCCATGCGCA CTGGGCTGCG CTTTGCCCGC
AGCGCCAAGC CTTTGCAGGC CGTGATGCTA CGCGCGTTGG CGTTCTTTTT CTGCGCCAGC
GCCGGCACTT CGCTGCTGCC GCTGATCGTG CGTGGCGAGA TGCGCGGCAC CGCAGCGGAC
TTCGGCCTGC TGCTGGCGGC CATCGGTATT GGCGCAGTGG CGGGTGCCAC CTTGCTGCCG
CGCCTGCGTG AGCGCATCAG CCGTGACCGC CTGGTGTTAC TGGCCAGCCT GCTGTATGCC
CTGTTCCTGC TGGCCCTGGC GCTGGTGCGA AACTTCTATG CGCTGCTGCC CGCGATGCTG
CTCAGTGGCG CGGCGTGGAT CGCGGTGCTG TCCAACCTGC AGGTGGCTGC ACAGACTTCG
GTGCCCGCCT GGGTACGGGC GCGGGCTTTG TCGGTATACA TTCTGATTTT CTTCGGCGCC
ATGGCCTGTG GCGGCCTGCT GTGGGGCACA CTGGCCAGCC ATGCAACGAT CACCTTCAGC
CTGCTGCTGG CCGCAGGCGG CCTGGCGCTG GGCACCTTGC TGACCTGCAA GGTGGCGCTG
CCGGAAACCG AGGCAGAGGA GCTGACGCCG TCGCTGCATT GGCCGGTGCC GGTATTGAGC
GATGACATGG ACAAGGAAGT CGGACCGGTG ATGGTCACCG TCGAGTACCA CATCGCCCCC
ACCAAGGCCG AGGCCTTCCA GCAGGCGGCG CGGGAGCTGG AAGCGATGCG CAAGCGCAAT
GGCGCATTGT CGTGGGGGTT GATGCGGGAC AGTGCTGATC CGGCGTTGTG GCTGGAGTTC
TTCTTCGAGG AGTCGTGGCT GGAGCATCTG CGGCATCACC ACCGGGTGAC CCGTGGTGAA
CTGAAGATCG AGGCGCGGGT CAGGATGCTG CAGACCGATG GGGTTGAAGT GCGGATTCGG
CATTTGTTGG CTGGCGGGGA GCATAAGGCT CACCATTGA
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| Protein sequence | MSTSPSGAWS PLRNTTFRML WIATIASNIG TWMHEVGAGW LMTTLSASPL HVALIQVAGS
LPMFFLALPA GAAADIVDKR RYLLLVQLWM SCVAVVLAAL TLLGMMNVTL LLVLTLALGI
GTALMMPAWS ALTPELVGKE DLADAVALSS VGINVSRAIG PALAGVVVSM VGPWLTFALN
AISFAGVILV LFLWKREVKE PLLPAERFVG AMRTGLRFAR SAKPLQAVML RALAFFFCAS
AGTSLLPLIV RGEMRGTAAD FGLLLAAIGI GAVAGATLLP RLRERISRDR LVLLASLLYA
LFLLALALVR NFYALLPAML LSGAAWIAVL SNLQVAAQTS VPAWVRARAL SVYILIFFGA
MACGGLLWGT LASHATITFS LLLAAGGLAL GTLLTCKVAL PETEAEELTP SLHWPVPVLS
DDMDKEVGPV MVTVEYHIAP TKAEAFQQAA RELEAMRKRN GALSWGLMRD SADPALWLEF
FFEESWLEHL RHHHRVTRGE LKIEARVRML QTDGVEVRIR HLLAGGEHKA HH
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