| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5159 |
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| Symbol | |
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| ID | 5192865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5796719 |
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| End bp | 5797630 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589642 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001270461 |
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| Protein GI | 148550359 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.345446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.286178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGACC TCAACTCCCT CTACTACTTC ACCCAGGTCG TCGAACATGG CGGCTTCGCC
CCGGCCGGGC GGGCGCTGGA CATGCCCAAG TCAAAACTCA GCCGGCGAAT CGCCGACCTT
GAAGACCGCC TGGGTGTGCG GCTGTTGAAC CGCACCAGCC GCCACTGCTC GCTGACCGAA
ATCGGCCAGG CCTACTACAA CCGTTGCCTG GCCATGCGCG TGGAGGCCGA GGGTGCAGCA
GAGATCATCG AGCGCAACCG CAGCGAACCG CGCGGCCTGG TGCGCATCAG CTGCCCGACC
ACCCTGCTCA ACTCCTGGGT CGGGCCGATG CTGACCCGCT ACATGCTCAA GTACCCGCAG
GTGGAGCTGT TCATCGAAAG TACCAACCGC CGTGTCGACC TGTTGCACGA GGGCTTCGAT
ATTGCTCTGC GGGTGCGCTT TCCGCCGCTG GAGAACACTG ACATGGTGAT GAAGGTGCTG
AGCAACAGCA CCCAGTGCCT GGTCGGTCAA CCTCAATACC TGGCGCAACT GCCCAAAGGC
TTTGATCCGC AGCTGCTGGG CACGCTACCC AGCGTGCATT GGGGCAGTGC CCAGCGCGAG
TACCAGTGGG AACTGTTCCA GGGTGAGGAC AACAGCCGCA GCATCGTCAT CCCGCATACA
CCACGCATGG TGACTGATGA CCTGTTTGCC TTGCGCCACT TCGTGGTAGC CGGAGTGGGG
ATTGCACACT TGCCGCGGGT GGCGGTGCGT GAGGACCTGG CGGCAGGACG CCTGGTTGAG
CTGATTCCAG ACTGGCACCC GCGTTGCGGC ATCGTGCATG CGATCTTCCC ATCGCGACGT
GGGTTGCTGC CTTCGGTGCG AGCGCTGATC GATCATCTGG CTGAGGAGTT CGCCATCAGC
GACATGGCTT GA
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| Protein sequence | MEDLNSLYYF TQVVEHGGFA PAGRALDMPK SKLSRRIADL EDRLGVRLLN RTSRHCSLTE
IGQAYYNRCL AMRVEAEGAA EIIERNRSEP RGLVRISCPT TLLNSWVGPM LTRYMLKYPQ
VELFIESTNR RVDLLHEGFD IALRVRFPPL ENTDMVMKVL SNSTQCLVGQ PQYLAQLPKG
FDPQLLGTLP SVHWGSAQRE YQWELFQGED NSRSIVIPHT PRMVTDDLFA LRHFVVAGVG
IAHLPRVAVR EDLAAGRLVE LIPDWHPRCG IVHAIFPSRR GLLPSVRALI DHLAEEFAIS
DMA
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