| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5140 |
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| Symbol | |
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| ID | 5195019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5773873 |
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| End bp | 5774568 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589623 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001270442 |
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| Protein GI | 148550340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AGCTGATCAC CTTCGACCTC GACGATACCC TGTGGGACAC CGCGCCGGTG
ATTGCTACCG CGGAAGTCGT GCTGCGCGAC TGGCTCGAGG CCAACGCACC CACCCTCGGC
AGCGTGCCGG TGGAACACCT GTTCGCCATC CGCGAGCGCC TGGTGCAAGC AGAGCCCGGC
CTCAAGCACC GCATCAGTGC CCTGCGCAGG CGCGTGCTGT TTCATGCCCT GGAAGAGGTC
GGCTACAGCG AGCAGCACGC CCAGGCGCTG GCCAACGAAG GCTTCGAAGT GTTCCTGCAT
GCCCGCCACC AGGTGGAGAT CTTCCCAGAG GTGCAGCCGG TGCTTGAAAT CTTGCGCCAT
CAATACATCC TGGGCGTGGT CACCAACGGC AATGCCGACG TCAGCCGGCT AGGGCTGGCG
GATTACTTCC GCTTTGCCCT GTGCGCCGAG GACCTGGGCA TCGGCAAACC AGACCCTGCA
CCATTCCTTG AAGCGTTGCG CCGCGGCGAG GTGGACGCGG GTGCGGCAGT GCACATCGGC
GATCACCCTG GCGATGACAT TGCCGGTGCC CAGCGCGCCG GGTTGCGGGC GGTGTGGTTC
AACCCGCAAG GCAAGGCCTG GGCTGGCGAT CAGGCGCCGG ACGCCGAGAT CCAGCGCCTG
TCGCAACTAC CTGACGTGCT TGCACGCTGG CGCTGA
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| Protein sequence | MSIKLITFDL DDTLWDTAPV IATAEVVLRD WLEANAPTLG SVPVEHLFAI RERLVQAEPG
LKHRISALRR RVLFHALEEV GYSEQHAQAL ANEGFEVFLH ARHQVEIFPE VQPVLEILRH
QYILGVVTNG NADVSRLGLA DYFRFALCAE DLGIGKPDPA PFLEALRRGE VDAGAAVHIG
DHPGDDIAGA QRAGLRAVWF NPQGKAWAGD QAPDAEIQRL SQLPDVLARW R
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