| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5139 |
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| Symbol | xerC |
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| ID | 5191667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5772977 |
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| End bp | 5773876 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589622 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001270441 |
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| Protein GI | 148550339 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC AGCTGGAGGC TTATTGCGCA CACCTGCGCA ACGAGCGCCA GGTGTCGGAG
CACACCTTGC TGGGCTACCG TCGCGACCTG GAAAAAGTCA TCGCCTACTG CAAAGAACAC
GGCATTGCCG AGTGGCAGGC GCTGCAAATC CAGCAACTGC GCCAGCTGAT CGCCCGCTTG
CACCACCATG GCCAGTCCCC GCGCAGCCTG GCACGCCTGC TGTCGGCAGT ACGCGGCCTG
TACCGTTACC TCAACCGCGA AGGCCTGTGC CAGCACGACC CGGCCACCGG CCTGAGCGCA
CCCAAAGGTG AGCGTCGGCT GCCCAAGGTA CTGGATACCG ATCGCGCACT GCAGCTGCTC
GATGGTGGCG TCGACGACGA CTTCATTGCC CGGCGTGACC AGGCGATCCT CGAGCTGTTC
TATTCCTCAG GCCTACGCCT ATCGGAACTG ACCAACCTCG ATCTTGATCA CCTCGACCTC
GCCGCCGGCC TGGTGCAGGT ACTGGGCAAG GGTGGAAAAG CCCGCGTACT GCCGGTGGGT
CGCAAGGCTC GCGAGGCGTT GCAGGCCTGG TACCGCTTGC GCGGCATCGG CAACCCACGC
GACCGTGCAG TGTTCATCAC CCGCCAGGGC AATCGCATCA GCCCCCAGGC AGTTCGGCTG
CGGGTAAAGG CCGCCGGTGA GCGTGAGCTG GGCCAACACC TGCACCCGCA CATGCTTCGC
CATTCCTTCG CCAGCCATGT GCTGGAATCA TCCCAGGACC TGCGCGCGGT GCAGGAGATG
CTCGGCCACG CCGACATCAG CACGACGCAA ATCTACACCC ACCTGGACTT CCAGCACCTG
GCCGCGGTGT ACGACAGCGC CCACCCTCGG GCCAAACGCA GCAAAGGCAC AGACTCATGA
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| Protein sequence | MKRQLEAYCA HLRNERQVSE HTLLGYRRDL EKVIAYCKEH GIAEWQALQI QQLRQLIARL
HHHGQSPRSL ARLLSAVRGL YRYLNREGLC QHDPATGLSA PKGERRLPKV LDTDRALQLL
DGGVDDDFIA RRDQAILELF YSSGLRLSEL TNLDLDHLDL AAGLVQVLGK GGKARVLPVG
RKAREALQAW YRLRGIGNPR DRAVFITRQG NRISPQAVRL RVKAAGEREL GQHLHPHMLR
HSFASHVLES SQDLRAVQEM LGHADISTTQ IYTHLDFQHL AAVYDSAHPR AKRSKGTDS
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