Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5125 |
Symbol | |
ID | 5192101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5758320 |
End bp | 5759822 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589608 |
Product | Ppx/GppA phosphatase |
Protein accession | YP_001270427 |
Protein GI | 148550325 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCATA CCATCGCGAA GAACCTGTCC CTGATCGCCG CCATCGACCT TGGCTCCAAC AGTTTTCACA TGGTCGTGGC CAAGGCCCAC CATACCGAAA TCCGTATCCT TGAGCGGCTC GGCGAGAAGG TTCAACTGGC CGCCGGCATC GACGAAGAGC GCATGCTCAG TGAAGAGGCA ATGGAAAGGG GCCTGGATTG CCTCAAGCGC TTTTCCCAGC TGATCAACGG CATGCCGGCA GGCGCCGTGC GTATCGTCGG TACCAACGCC TTGCGCGAAG CGCGCAACCG TAACGAATTC ATCCAGCGCG CCGAAGCCAT CCTCGGCCAC CCGGTGGAGG TCATCTCTGG CCGTGAAGAG GCGCGCCTGA TCTACCTGGG CGTGTCGCAC ACCCTGGCCG ACACCCCCGG CAAGCGCCTG GTGGCCGACA TCGGCGGCGG CAGTACCGAG TTCATCATCG GCCAGCGCTT CGAGCCGCTG CTGCGTGAAA GCCTGCAGAT GGGTTGCGTG AGCTTTACCC AGCGTTACTT CCGCGACGGC AAGATCACCC CAGCCCGCTA TGCCCAGGCC TACACGGCCG CGCGCCTGGA ACTGATGAGC ATCGAAAATG CCCTGCACCG CCTGACCTGG GATGAGGCCA TCGGCTCATC CGGCACCATT CGCGCCATCG GCGCTGCCAT CAAGGCCGGT GGCCTGGGCA ATGGCGAGGT CAACGCCGAA GGCCTGGCCT GGGTCAAACG CAAGCTGTTC AAGCTGGGCG AGGTCGACAA GATCGACTTC GACGGCGTCA AGCCAGACCG CCGCACTATC TTCCCGGCGG GCTTGGCGAT TCTCGAAGCG ATCTTCGATG CCCTTGAACT GAACCGCATG GACCACTGCG ACGGCGCCCT GCGCGAAGGT GTGCTGTTCG ATCTGCTTGG CCGCCACCAC CACGAAGACG TGCGCGAACG CACCCTGAAC TCGCTGATGG AGCGCTATCA CGTGGACCAG GGCCAGGCTG CGCGCGTCGA GCGCAAGGCG TTGCACGCAT TCGACCAGGT GGCCGACGCT TGGAACCTGA AAGACGGAAA CTGGCGCGAT CTACTGGGCT GGGCCGCGAA AGTGCACGAA ATCGGGCTGG ACATTGCCCA TTATCACTAC CACAAGCACG GCGCCTATCT GATCGAGCAC TCGGACCTGG CAGGCTTTTC CCGGGAAGAT CAGCAGATGA TGGCCCTGCT GGTACGCGGC CACCGCCGCA ACATCCCCAA GGACCGCTAC GCCGAACTGG GTGATGAAGG GGTCAAGCTG CTGCGCCTGT GCGTGCTGCT GCGCTTTGCC ATCCTGTTCC ACCACATCCG CGGCACTCAG CAAATGCCAA AGGTAGAACT GCACGGCGGG GACAACAGCC TGGATGTAGC CTTCCCTGAC GGTTGGCTGG AGCAGAACCA GCTGACCCAG GCCGACTTCG CCAACGAGGC GGAGTGGCTG GCCCGGGTCG GCTTCGTCCT CAGCGTACGT TGA
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Protein sequence | MPHTIAKNLS LIAAIDLGSN SFHMVVAKAH HTEIRILERL GEKVQLAAGI DEERMLSEEA MERGLDCLKR FSQLINGMPA GAVRIVGTNA LREARNRNEF IQRAEAILGH PVEVISGREE ARLIYLGVSH TLADTPGKRL VADIGGGSTE FIIGQRFEPL LRESLQMGCV SFTQRYFRDG KITPARYAQA YTAARLELMS IENALHRLTW DEAIGSSGTI RAIGAAIKAG GLGNGEVNAE GLAWVKRKLF KLGEVDKIDF DGVKPDRRTI FPAGLAILEA IFDALELNRM DHCDGALREG VLFDLLGRHH HEDVRERTLN SLMERYHVDQ GQAARVERKA LHAFDQVADA WNLKDGNWRD LLGWAAKVHE IGLDIAHYHY HKHGAYLIEH SDLAGFSRED QQMMALLVRG HRRNIPKDRY AELGDEGVKL LRLCVLLRFA ILFHHIRGTQ QMPKVELHGG DNSLDVAFPD GWLEQNQLTQ ADFANEAEWL ARVGFVLSVR
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