Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5115 |
Symbol | |
ID | 5193451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5746393 |
End bp | 5749113 |
Gene Length | 2721 bp |
Protein Length | 906 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589598 |
Product | ABC transporter related |
Protein accession | YP_001270417 |
Protein GI | 148550315 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC CGGCACTGCT GGCCGAAGGC ATCAGCCACC GTTACGGCGA CGTGATAGCC CTCCACCCAC TAGGCTTCAG CCTCCCTGTG GGTACCCGCT GCGCGCTGAT AGGCCCTGAC GGGGCGGGCA AATCGACCCT GCTGGGGCTG ATCGCCGGCG TGAAACGCCT ACAGCAGGGA GAGCTGCAGG TGCTGGGTGG CTCGATCCGC CAACGCCGCC ATCGCACGGC GCTCTACCCC AAAGTGGCGT TCATGCCGCA AGGGCTGGGC AACAACCTGT ACCCGGAACT GTCGATCAGC GAGAACATCC GTTTTTTTGC CACCCTGTTC GGGCTGGGCC GCCGTGAGTG TGAACAGCGC ATGGCCAATC TGTTGCAGGC CACCGACCTG CAGCGCTTTG CCCAGCGCCC GGCCGGCAAG CTGTCGGGGG GCATGAAGCA GAAGCTGGGC CTTTGCTGCG CGCTGATCCA CGAACCAGAC CTGCTTATCC TGGACGAGCC GACCACCGGC GTCGACCCAC TGTCGCGGCG GCGCTTCTGG GAGCTGGTTG AACAGGTTCG CGCACAACGC CCGCAACTGA CCTTGCTGGT GGCTACCGCC TACATGGAAG AAGCCGAACA GTTCGAGCAT TGCCTGATGC TCGATGGCGG CCGGCTGCTG GCCGCCGGCC CTAGCCACGA ACTGGCTGCA GTCACCCCGA GCGGCAAACT GGATGATGCC TTTACCCACT ACCAGGGCGC GGGCAAGTCG CAGCATCAAC CACTGGCAAT CCCGCCGCGC CAAGCCACGG ACGGCCCGGT CGCCATCGAG GCACACGACC TGACCCTGCG CTTTGGCGAC TTCACAGCGG TGAACAAGGT CAGTTTCGCC ATTGGCCGCG GGGAGATCTT CGGCTTCCTG GGTTCCAACG GTTGCGGCAA GACCACCACC ATGAAAGTGC TCACCGGCCT GATGCCGGCC AGCGAGGGCA GCGCCAGCCT GCTGGGTCGC CCGGTGGACG CCAGCGACCT GGCCACACGC AAGCGGGTCG GCTTCATGTC GCAGAGTTTC TCTCTGTATG GCGAGCTCAG CACCCGGCAG AACCTGGCCC TGCATGCCCG CCTGTTCGAC TTGCCCAAAG CCGAGAGCGC CCAGCGCATC GATGAGCTGA TCGAACGCTT CGACCTCGCC GCTATCGCCG ACCAACCGTC TGGCGCCCTG CCCCTTGGTT TGCGCCAGCG CCTGTCGCTG GCGGTGGCGG TTCTGCATCG CCCGGAAGTC TTGATCCTCG ACGAACCGAC CTCCGGCGTC GACCCCGCCG CCCGCGACGA CTTCTGGCGC CTGCTGGTAG AACTGTCCCG CGAGCAGGGC GTGACCATTT TCCTCTCCAC CCACTTCATG AACGAGGCCC AGCGCTGCGA TCGTATTTCG CTGATGCACG CCGGGCGGGT GCTGGCCTGC GACACGCCCG ATGCCCTGCA GCACCAGTAC CAGGGCGATA CGCTGGAGGA CGCGTTCGTC CGCTGCCTGG AACAGGCCCA GGAACTGGCC CCAGCCGCCA CCGACAGCAG CGTGCTGGAA CAGGCGTCCA CCCCCACCCT ACCGCTGCGC CAGGGCTTCA GCCTGCGCCG CCTGCTGGCA GTGGCCGGCC GTGAGGGCAA GGAGCTGCTG CGCGACAAGG TGCGCCTGGC CTTCGCCTTA CTGGGTGCAC TGTTCATGAT GGTGATCTTC GGCTACGGCA TTTCACTGGA TGTGGAAAAC CTCGCCTTCG CCGTGCACGA TCAGGACCAG AGCCCGCAAA GTCGCGCCTA CCTCGAGGCC TTCCGTGGTT CACGCTACTT CGCCGAACAG GCACCGATCC GCGACAGCAG CGAGCTGCAC CAGCGCCTGC AACGCTCGGA AATCAAACTG GCACTGGAAA TTCCGCCCGG CTTTGGCCGC GATCTGTACG CAGGGCGCCA GCCGGTGGTG GCTGCCTGGC TCGACGGAGG CATGCCGTTC CGCGCAGAAA CCAGCCGCAA CTACGTGGAA GCCGTGCACC AGGCCAACCT TGAGCAACTG GCAAAGGCTA GCCCACAACC GCAGCCACGC CAGGACCCGG TGCGCCTGGA AACGCGTTTC CGCTACAACC AGGATGTGGT CAGTGTGAAC GCCATCGGCC CGGGTGTGAT GGCACTGATA CTGGCCTTCA TTCCGGCCAT GCTCACGGCA CTGGGCATCG TGCGCGAGAA GGAGCTCGGC TCCATCACCA ACTTCTACGC CACACCCCTC ACCCGCCTGG AATTCCTGCT TGGCAAGCAG ATGCCCTACC TGGCTGTGAG CCTGGTCAAC CTGGCGCTGC TGGTGGCGAT GAACCGCTGG CTGTTCGCCG TACCGCTCAA GGGCAGCGTA CTGGCTTTGG CATGTGGCGG CGTGGCCTAC CTGCTGGCAA CCACCAGCCT GGGCCTGCTG ATTTCGGCAT TCACCCGCAC CCAGATCGCC GCCATTCTCG GCACCATGAT CATTACCAGC CTGCCGACCA TCCAGTTTTC CGGGCTGATC GTGCCACGCT CGTCGCTGGA CGGCGCGGCA GCGGTGATGG GCCAGTTGTT CCCGGCGGGC TACTTCCTCG ACATCGCAGT CGGCACCTTC ACCAAGGCGT TAGGCCTGCG CGAGTTGTGG CCGCAGTGCC TGATCCTGCT GAGCTTCTTT GCCGCGTTCA CCGGCCTGAG CCTGGCAATG CTGAAAAAGC AGGAGGCCTG A
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Protein sequence | MNAPALLAEG ISHRYGDVIA LHPLGFSLPV GTRCALIGPD GAGKSTLLGL IAGVKRLQQG ELQVLGGSIR QRRHRTALYP KVAFMPQGLG NNLYPELSIS ENIRFFATLF GLGRRECEQR MANLLQATDL QRFAQRPAGK LSGGMKQKLG LCCALIHEPD LLILDEPTTG VDPLSRRRFW ELVEQVRAQR PQLTLLVATA YMEEAEQFEH CLMLDGGRLL AAGPSHELAA VTPSGKLDDA FTHYQGAGKS QHQPLAIPPR QATDGPVAIE AHDLTLRFGD FTAVNKVSFA IGRGEIFGFL GSNGCGKTTT MKVLTGLMPA SEGSASLLGR PVDASDLATR KRVGFMSQSF SLYGELSTRQ NLALHARLFD LPKAESAQRI DELIERFDLA AIADQPSGAL PLGLRQRLSL AVAVLHRPEV LILDEPTSGV DPAARDDFWR LLVELSREQG VTIFLSTHFM NEAQRCDRIS LMHAGRVLAC DTPDALQHQY QGDTLEDAFV RCLEQAQELA PAATDSSVLE QASTPTLPLR QGFSLRRLLA VAGREGKELL RDKVRLAFAL LGALFMMVIF GYGISLDVEN LAFAVHDQDQ SPQSRAYLEA FRGSRYFAEQ APIRDSSELH QRLQRSEIKL ALEIPPGFGR DLYAGRQPVV AAWLDGGMPF RAETSRNYVE AVHQANLEQL AKASPQPQPR QDPVRLETRF RYNQDVVSVN AIGPGVMALI LAFIPAMLTA LGIVREKELG SITNFYATPL TRLEFLLGKQ MPYLAVSLVN LALLVAMNRW LFAVPLKGSV LALACGGVAY LLATTSLGLL ISAFTRTQIA AILGTMIITS LPTIQFSGLI VPRSSLDGAA AVMGQLFPAG YFLDIAVGTF TKALGLRELW PQCLILLSFF AAFTGLSLAM LKKQEA
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