| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5115 |
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| Symbol | |
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| ID | 5193451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5746393 |
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| End bp | 5749113 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589598 |
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| Product | ABC transporter related |
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| Protein accession | YP_001270417 |
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| Protein GI | 148550315 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CGGCACTGCT GGCCGAAGGC ATCAGCCACC GTTACGGCGA CGTGATAGCC
CTCCACCCAC TAGGCTTCAG CCTCCCTGTG GGTACCCGCT GCGCGCTGAT AGGCCCTGAC
GGGGCGGGCA AATCGACCCT GCTGGGGCTG ATCGCCGGCG TGAAACGCCT ACAGCAGGGA
GAGCTGCAGG TGCTGGGTGG CTCGATCCGC CAACGCCGCC ATCGCACGGC GCTCTACCCC
AAAGTGGCGT TCATGCCGCA AGGGCTGGGC AACAACCTGT ACCCGGAACT GTCGATCAGC
GAGAACATCC GTTTTTTTGC CACCCTGTTC GGGCTGGGCC GCCGTGAGTG TGAACAGCGC
ATGGCCAATC TGTTGCAGGC CACCGACCTG CAGCGCTTTG CCCAGCGCCC GGCCGGCAAG
CTGTCGGGGG GCATGAAGCA GAAGCTGGGC CTTTGCTGCG CGCTGATCCA CGAACCAGAC
CTGCTTATCC TGGACGAGCC GACCACCGGC GTCGACCCAC TGTCGCGGCG GCGCTTCTGG
GAGCTGGTTG AACAGGTTCG CGCACAACGC CCGCAACTGA CCTTGCTGGT GGCTACCGCC
TACATGGAAG AAGCCGAACA GTTCGAGCAT TGCCTGATGC TCGATGGCGG CCGGCTGCTG
GCCGCCGGCC CTAGCCACGA ACTGGCTGCA GTCACCCCGA GCGGCAAACT GGATGATGCC
TTTACCCACT ACCAGGGCGC GGGCAAGTCG CAGCATCAAC CACTGGCAAT CCCGCCGCGC
CAAGCCACGG ACGGCCCGGT CGCCATCGAG GCACACGACC TGACCCTGCG CTTTGGCGAC
TTCACAGCGG TGAACAAGGT CAGTTTCGCC ATTGGCCGCG GGGAGATCTT CGGCTTCCTG
GGTTCCAACG GTTGCGGCAA GACCACCACC ATGAAAGTGC TCACCGGCCT GATGCCGGCC
AGCGAGGGCA GCGCCAGCCT GCTGGGTCGC CCGGTGGACG CCAGCGACCT GGCCACACGC
AAGCGGGTCG GCTTCATGTC GCAGAGTTTC TCTCTGTATG GCGAGCTCAG CACCCGGCAG
AACCTGGCCC TGCATGCCCG CCTGTTCGAC TTGCCCAAAG CCGAGAGCGC CCAGCGCATC
GATGAGCTGA TCGAACGCTT CGACCTCGCC GCTATCGCCG ACCAACCGTC TGGCGCCCTG
CCCCTTGGTT TGCGCCAGCG CCTGTCGCTG GCGGTGGCGG TTCTGCATCG CCCGGAAGTC
TTGATCCTCG ACGAACCGAC CTCCGGCGTC GACCCCGCCG CCCGCGACGA CTTCTGGCGC
CTGCTGGTAG AACTGTCCCG CGAGCAGGGC GTGACCATTT TCCTCTCCAC CCACTTCATG
AACGAGGCCC AGCGCTGCGA TCGTATTTCG CTGATGCACG CCGGGCGGGT GCTGGCCTGC
GACACGCCCG ATGCCCTGCA GCACCAGTAC CAGGGCGATA CGCTGGAGGA CGCGTTCGTC
CGCTGCCTGG AACAGGCCCA GGAACTGGCC CCAGCCGCCA CCGACAGCAG CGTGCTGGAA
CAGGCGTCCA CCCCCACCCT ACCGCTGCGC CAGGGCTTCA GCCTGCGCCG CCTGCTGGCA
GTGGCCGGCC GTGAGGGCAA GGAGCTGCTG CGCGACAAGG TGCGCCTGGC CTTCGCCTTA
CTGGGTGCAC TGTTCATGAT GGTGATCTTC GGCTACGGCA TTTCACTGGA TGTGGAAAAC
CTCGCCTTCG CCGTGCACGA TCAGGACCAG AGCCCGCAAA GTCGCGCCTA CCTCGAGGCC
TTCCGTGGTT CACGCTACTT CGCCGAACAG GCACCGATCC GCGACAGCAG CGAGCTGCAC
CAGCGCCTGC AACGCTCGGA AATCAAACTG GCACTGGAAA TTCCGCCCGG CTTTGGCCGC
GATCTGTACG CAGGGCGCCA GCCGGTGGTG GCTGCCTGGC TCGACGGAGG CATGCCGTTC
CGCGCAGAAA CCAGCCGCAA CTACGTGGAA GCCGTGCACC AGGCCAACCT TGAGCAACTG
GCAAAGGCTA GCCCACAACC GCAGCCACGC CAGGACCCGG TGCGCCTGGA AACGCGTTTC
CGCTACAACC AGGATGTGGT CAGTGTGAAC GCCATCGGCC CGGGTGTGAT GGCACTGATA
CTGGCCTTCA TTCCGGCCAT GCTCACGGCA CTGGGCATCG TGCGCGAGAA GGAGCTCGGC
TCCATCACCA ACTTCTACGC CACACCCCTC ACCCGCCTGG AATTCCTGCT TGGCAAGCAG
ATGCCCTACC TGGCTGTGAG CCTGGTCAAC CTGGCGCTGC TGGTGGCGAT GAACCGCTGG
CTGTTCGCCG TACCGCTCAA GGGCAGCGTA CTGGCTTTGG CATGTGGCGG CGTGGCCTAC
CTGCTGGCAA CCACCAGCCT GGGCCTGCTG ATTTCGGCAT TCACCCGCAC CCAGATCGCC
GCCATTCTCG GCACCATGAT CATTACCAGC CTGCCGACCA TCCAGTTTTC CGGGCTGATC
GTGCCACGCT CGTCGCTGGA CGGCGCGGCA GCGGTGATGG GCCAGTTGTT CCCGGCGGGC
TACTTCCTCG ACATCGCAGT CGGCACCTTC ACCAAGGCGT TAGGCCTGCG CGAGTTGTGG
CCGCAGTGCC TGATCCTGCT GAGCTTCTTT GCCGCGTTCA CCGGCCTGAG CCTGGCAATG
CTGAAAAAGC AGGAGGCCTG A
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| Protein sequence | MNAPALLAEG ISHRYGDVIA LHPLGFSLPV GTRCALIGPD GAGKSTLLGL IAGVKRLQQG
ELQVLGGSIR QRRHRTALYP KVAFMPQGLG NNLYPELSIS ENIRFFATLF GLGRRECEQR
MANLLQATDL QRFAQRPAGK LSGGMKQKLG LCCALIHEPD LLILDEPTTG VDPLSRRRFW
ELVEQVRAQR PQLTLLVATA YMEEAEQFEH CLMLDGGRLL AAGPSHELAA VTPSGKLDDA
FTHYQGAGKS QHQPLAIPPR QATDGPVAIE AHDLTLRFGD FTAVNKVSFA IGRGEIFGFL
GSNGCGKTTT MKVLTGLMPA SEGSASLLGR PVDASDLATR KRVGFMSQSF SLYGELSTRQ
NLALHARLFD LPKAESAQRI DELIERFDLA AIADQPSGAL PLGLRQRLSL AVAVLHRPEV
LILDEPTSGV DPAARDDFWR LLVELSREQG VTIFLSTHFM NEAQRCDRIS LMHAGRVLAC
DTPDALQHQY QGDTLEDAFV RCLEQAQELA PAATDSSVLE QASTPTLPLR QGFSLRRLLA
VAGREGKELL RDKVRLAFAL LGALFMMVIF GYGISLDVEN LAFAVHDQDQ SPQSRAYLEA
FRGSRYFAEQ APIRDSSELH QRLQRSEIKL ALEIPPGFGR DLYAGRQPVV AAWLDGGMPF
RAETSRNYVE AVHQANLEQL AKASPQPQPR QDPVRLETRF RYNQDVVSVN AIGPGVMALI
LAFIPAMLTA LGIVREKELG SITNFYATPL TRLEFLLGKQ MPYLAVSLVN LALLVAMNRW
LFAVPLKGSV LALACGGVAY LLATTSLGLL ISAFTRTQIA AILGTMIITS LPTIQFSGLI
VPRSSLDGAA AVMGQLFPAG YFLDIAVGTF TKALGLRELW PQCLILLSFF AAFTGLSLAM
LKKQEA
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