| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5111 |
|---|
| Symbol | |
|---|
| ID | 5193806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5743933 |
|---|
| End bp | 5744541 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640589594 |
|---|
| Product | 5-formyltetrahydrofolate cyclo-ligase |
|---|
| Protein accession | YP_001270413 |
|---|
| Protein GI | 148550311 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.170961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA ACGTGCCGCT CACCCGCCCC CAGCTTCGTC GCCTGCTTCG CAATGCCCGC
CGCGCCCTTA CCCCTGCCCA GCAACGCCAG GCCACCCTCG GCCTGTACCG CCAACTGGCG
CAACACCCCT TGTTCCGCCG CGCCCGCCAC ATCGCCCTGT ACCTGCCCAA CGACGGTGAA
ATCGACCCTC GCCTGCTGAT GCGCGAAGCC CAGCGTCGCG GCAAGTGCAC CTACCTGCCG
GTGCTGCACG CCTGGCCGCG CACGCGCATG GTGTTCCAGC GTTTTGAGCA GGGTGAGAAG
CTCAAGCCCA ACCGCTTCCG TATTCCAGAG CCGATTATCG ACCGCAAACG CCAGCGGCCG
ATCTGGGCGC TGGATCTGAT TCTGCTACCG CTGGTCGGCT TTGACGAAGT GGGCGGCCGC
TTGGGTATGG GCGGTGGCTT CTATGATCGC AGCCTGGCCT ACCAGGCGCG TCGGCAAACC
TGGAAAAAAC CGTTGCTGCT GGGGCTGGCG CATGAATGCC AGAAGGTCGA GCGGCTGGCG
CAGGCCAGTT GGGATGTACC GCTGAAGGGC ACGGTCTCGG ACCGTGGCTG GTACCTGGCG
CCACGTTGA
|
|---|
| Protein sequence | MTENVPLTRP QLRRLLRNAR RALTPAQQRQ ATLGLYRQLA QHPLFRRARH IALYLPNDGE
IDPRLLMREA QRRGKCTYLP VLHAWPRTRM VFQRFEQGEK LKPNRFRIPE PIIDRKRQRP
IWALDLILLP LVGFDEVGGR LGMGGGFYDR SLAYQARRQT WKKPLLLGLA HECQKVERLA
QASWDVPLKG TVSDRGWYLA PR
|
|---|
| |