Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5107 |
Symbol | |
ID | 5191479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5741020 |
End bp | 5742354 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589590 |
Product | peptidase M24 |
Protein accession | YP_001270409 |
Protein GI | 148550307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.132845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACA TTCCCAAGGC CGAGTATGCC CGTCGGCGCA AGGCGCTGAT GGCGCAGATG GTCCCCAACA GCATTGCCAT TCTGCCCGCC GCTGCGGTTG CCATCCGCAA CCGCGACGTC GAGCACGTGT ACCGCCAGGA CAGCGACTTC CAGTACCTCA GCGGCTTCCC GGAGCCCGAG GCGGTGATTG CTTTGATTCC AGGGCGCGAG CATGGCGAAT ACGTGCTGTT CTGCCGTGAA CGCAACCCCG AGCGCGAGCT GTGGGACGGC CTGCGGGCCG GCCAGGAAGG GGCGGTGCGC GATTTCGGCG CTGACGATGC CTTCCCCATC ACGGATATCG ACGAAATCCT GCCTGGCCTG ATCGAAGGCC GCGAGCGGGT CTACAGCGCC ATGGGCAGCA ACCCGGAGTT CGACCGCCGG CTGATGGACT GGATCAACGT GATCCGCTCC AAGGCACGCC TGGGCGCCCA GCCACCGAAC GAGTTCGTTG CGCTGGATCA TCTGCTGCAT GATATGCGCC TGTATAAATC GGCGGCGGAA GTGAAGGTGA TGCGTGCTGC TGCAGACATT TCTGCGCGTG CCCATGTGCG GGCCATGCAG GCCTGCCGCG CCGGGCTGCA CGAGTACAGC CTGGAAGCCG AGCTGGACTA CGAATTCCGC AAGGGCGGGG CGAAGATGCC GGCCTACGGC TCGATCGTTG CGGCCGGGCG CAATGGCTGC ATCCTGCACT ATCAACAGAA CGATGCGCCG CTCAAGGATG GCGACCTGGT GCTGATCGAC GCCGGCTGCG AAATCGACTG CTATGCCAGC GACATCACCC GCACCTTCCC GGTCAGTGGG CGGTTTTCGC CCGAGCAGAA GGCCATCTAC GAGCTGGTGC TAAAGGCGCA GGCGGCGGCG TTTGCCGAAA TAGCCCCCGG CAAGCACTGG AACCACGCCC ATGAGGCGAC CGTGCGGGTC ATCACCGCGG GCCTGGTGGA GCTGGGCTTG CTCGAAGGTG ATGTGCAGGC GCTGATCGAC AGCGAAGCCT ATCGCGCCTT CTACATGCAC CGCGCCGGGC ACTGGCTGGG CATGGATGTG CATGACGTGG GCGAGTACAA GGTGGGCGGC GAGTGGCGGG TGCTGGAACC CGGCATGGCG CTGACCGTGG AGCCGGGTAT CTACATTGGC GCCGACAATC AGGCCGTGGC CAAAAAGTGG CGCGGCATTG GGGTAAGGAT CGAGGACGAC GTGGTAGTGA CCAGGCAAGG TTGTGAAATC CTGACTTCGG GCGTGCCGCG TACCATCGCC GAGATCGAGG CGCTGATGCA GGCTGCCCGC AAGGCCGTGG CATGA
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Protein sequence | MSHIPKAEYA RRRKALMAQM VPNSIAILPA AAVAIRNRDV EHVYRQDSDF QYLSGFPEPE AVIALIPGRE HGEYVLFCRE RNPERELWDG LRAGQEGAVR DFGADDAFPI TDIDEILPGL IEGRERVYSA MGSNPEFDRR LMDWINVIRS KARLGAQPPN EFVALDHLLH DMRLYKSAAE VKVMRAAADI SARAHVRAMQ ACRAGLHEYS LEAELDYEFR KGGAKMPAYG SIVAAGRNGC ILHYQQNDAP LKDGDLVLID AGCEIDCYAS DITRTFPVSG RFSPEQKAIY ELVLKAQAAA FAEIAPGKHW NHAHEATVRV ITAGLVELGL LEGDVQALID SEAYRAFYMH RAGHWLGMDV HDVGEYKVGG EWRVLEPGMA LTVEPGIYIG ADNQAVAKKW RGIGVRIEDD VVVTRQGCEI LTSGVPRTIA EIEALMQAAR KAVA
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