Gene Pput_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5105 
Symbol 
ID5190684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5739345 
End bp5739827 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content61% 
IMG OID640589588 
Producthypothetical protein 
Protein accessionYP_001270407 
Protein GI148550305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0979763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CGCGTAAACT GGCGCGCCGG GCGCGCATGC TGCGCTGGAT GCTGAACCTC 
TACCCACCGT ACCTGGGTGC CGGTATTCGT GTGCAGCACA TCAGCCCGGA CCTGCGTAGC
GTCAAGGTGG CGATGAAACT GACTCGCTGG AACCGCAATT ACGTCGGTAC CCAGTTCGGT
GGCAGCCTGT ATGCCATGGT CGATCCGTTC TACATGCTGC TGTTGATCGA GCAGCTGGGG
CGTGACTACA TCGTCTGGGA CAAGGCCGCC AGCATCGATT TCATCTCGCC GGGCAAAGGC
CCGGTGTATG CCGAATTCCA CGTCGATGAT GCGCTGCTGC AGGAAATCCG CCAGCAGGCC
GCCACCGGCA AGAAATGCCT GCCGCGTTTG CAGGTCGATA TCCGCGATGG CGCCGGCGAG
TTGGTGGCGC GGGTCGATAA AACCCTATAC GTGCGGCTCA AGCCGCAAGC GAGGCTGGCG
TAA
 
Protein sequence
MSNPRKLARR ARMLRWMLNL YPPYLGAGIR VQHISPDLRS VKVAMKLTRW NRNYVGTQFG 
GSLYAMVDPF YMLLLIEQLG RDYIVWDKAA SIDFISPGKG PVYAEFHVDD ALLQEIRQQA
ATGKKCLPRL QVDIRDGAGE LVARVDKTLY VRLKPQARLA