| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5101 |
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| Symbol | gcvT |
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| ID | 5195496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5733938 |
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| End bp | 5735020 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589584 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001270403 |
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| Protein GI | 148550301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.471331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GCACGCTTTT GTATGACCTG CACCTGGCGC TAGGCGCCAA GACGGTCGAT
TTCGGTGGCT GGGACATGCC CCTGCACTAT GGCTCGCAGG TCGAGGAGCA CCACCAGGTG
CGCAGCGATT GCGGCGTCTT CGATGTCTCC CATATGACCG TGATCGATGT CGACGGCACT
GATGCCACTG TTTGGCTGCA GCGCTTGCTG GCCAACGATG TGGCCCGCCT CGACGACACC
GGCAAGGCGC TGTATAGCCC ACTGCTGAAC GAACAGGGCG GTGTAATCGA TGATCTGATC
GTCTACCGCA CGGAAACCGG CTATCGCCTG GTCAACAACG CCGCCACCCG TGCCAAGGTG
CTCGATTGGC TGCAATCGCA GCGTGCCGGG TTTTCCGTGG ACTTCCAGGT CCGCCCTGAT
CTGGCCATCC TTGCCATCCA GGGGCCGCGG GCCCGCGAAA AGGTCGCGGC CCTGCTCAGC
CCCGCGCGCG CTGCACTCAT CCGCGAACTG CGCCCGTTCG AGGGCGTTGC TGACGGCGAC
TGGTTCATTG CCCGCACCGG CTATACCGGT GAGGACGGCC TGGAGATCAT CTTCCCGGGC
GATCAGGCGG TGGCCTTCTT CAACGACCTG GTCGGCGCCG GTATCGCCCC AAGCGGCCTG
GGCGCCCGCG ATACCCTGCG CCTGGAAGCC GGCATGAACC TGTACGGCCA GGACATCGAC
GAAAACCACA CCCCGCTCAC CTCCAACCTG GGCTGGAGCA TCGCCTGGGA ACCGGCCGAG
CGCGACTTCA TCGGCCGTGT CGGCCTGCTT GCGGAAATCG AGCACGGCGT GCAGGAAAAA
CTGGTGGGTC TGGTGCTGGA AGAGCGCGGT GTACTGCGCG CCCATCAGGT CGTGCGTGTA
GCCGGCATTG GCGAAGGGGA GATCACCAGT GGTAGTTTCT CGCCTACGCT GAGCAAGTCC
ATTGCGTTGG CGCGCGTGCC TATGGCTACC GGTGATCGGG CCGAGGTGGA AATTCGCGGC
AAGTGGTACC CGGTGCGGGT GGTCAAACCG ACCTTCGTGC GCCACGGCAA GATCCTGATC
TGA
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| Protein sequence | MGQRTLLYDL HLALGAKTVD FGGWDMPLHY GSQVEEHHQV RSDCGVFDVS HMTVIDVDGT
DATVWLQRLL ANDVARLDDT GKALYSPLLN EQGGVIDDLI VYRTETGYRL VNNAATRAKV
LDWLQSQRAG FSVDFQVRPD LAILAIQGPR AREKVAALLS PARAALIREL RPFEGVADGD
WFIARTGYTG EDGLEIIFPG DQAVAFFNDL VGAGIAPSGL GARDTLRLEA GMNLYGQDID
ENHTPLTSNL GWSIAWEPAE RDFIGRVGLL AEIEHGVQEK LVGLVLEERG VLRAHQVVRV
AGIGEGEITS GSFSPTLSKS IALARVPMAT GDRAEVEIRG KWYPVRVVKP TFVRHGKILI
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