| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5086 |
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| Symbol | |
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| ID | 5190669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5714462 |
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| End bp | 5715604 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589569 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001270388 |
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| Protein GI | 148550286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.162626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.269362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTTG CCTCCGGTGC CTATAAAAAA GCCCTCGAGG GTGGCCAGCA ACCCAAGCAG
GTGCTGGTCA AGATCGACCG GGTCACGAAA AAGTTCGACG AAACGGTAGC CGTGGACGAT
GTGTCCCTGG AAATCCGCAA GGGCGAGATC TTTGCCCTGC TGGGCGGCTC CGGTTCCGGC
AAGTCCACCT TGCTGCGCAT GCTGGCCGGC TTCGAGCGCC CGTCCGAAGG GCGGATCTTC
CTCGATGGCG TCGACATCAC CGACATGCCG CCGTACGAGC GGCCGATCAA CATGATGTTC
CAGTCCTACG CGCTGTTCCC GCACATGACC GTGGCGCAGA ACATCGCCTT CGGCCTGCAG
CAGGACAAGA TGCCCAAGGC CGAGATCGAT GCCCGCGTGG CCGAGATGCT CAAGCTGGTG
CACATGACCC AGTACGCCAA GCGCAAGCCG CACCAGTTGT CGGGCGGCCA GCGTCAGCGT
GTGGCGTTGG CCCGCTCGCT GGCCAAGCGC CCCAAACTGC TGCTGCTCGA CGAGCCGATG
GGTGCACTGG ACAAGAAACT GCGTTCGCAG ATGCAGCTGG AGCTGGTCGA GATCATCGAG
CGCGTGGGTG TAACCTGCGT GATGGTGACC CACGATCAGG AAGAGGCCAT GACCATGGCC
CAGCGCATCG CCATCATGCA CCTGGGCTGG ATCGCCCAGA TCGGCTCGCC AGTGGACATC
TACGAGACAC CTACCAGCCG CCTGGTGTGC GAGTTCATCG GTAACGTCAA CCTGTTCGAA
GGTGACGTGG TCGACGACGC CGAAGGCTAC GCGATCATTG CCAGCCCGGA GCTGGAGCGC
AAGATCTACG TGGGCCACGG CATCACCACC TCGGTGGAAG ACAAGCACAT CACCTACGCC
CTGCGCCCGG AAAAGATGCT GGTCACCACC CAGCAGCCAA CCTGCGAGCA CAACTGGTCG
CGCGGCAAGA TCCACGACAT CGCCTACCTC GGGGGCCACT CGGTGTTCTA TGTGGAGCTG
CCGAGCGGCA AGGTCGTGCA GTCGTTCGTC GCCAACGCCG AGCGCCAAGG TACCCGTCCG
ACCTGGGGCG ATGAAGTGTA CGTATGGTGG GAAGACGACA GCGGCGTGGT ACTGCGGTCA
TGA
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| Protein sequence | MAVASGAYKK ALEGGQQPKQ VLVKIDRVTK KFDETVAVDD VSLEIRKGEI FALLGGSGSG
KSTLLRMLAG FERPSEGRIF LDGVDITDMP PYERPINMMF QSYALFPHMT VAQNIAFGLQ
QDKMPKAEID ARVAEMLKLV HMTQYAKRKP HQLSGGQRQR VALARSLAKR PKLLLLDEPM
GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA QRIAIMHLGW IAQIGSPVDI
YETPTSRLVC EFIGNVNLFE GDVVDDAEGY AIIASPELER KIYVGHGITT SVEDKHITYA
LRPEKMLVTT QQPTCEHNWS RGKIHDIAYL GGHSVFYVEL PSGKVVQSFV ANAERQGTRP
TWGDEVYVWW EDDSGVVLRS
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