| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5082 |
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| Symbol | |
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| ID | 5190816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5710751 |
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| End bp | 5711839 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589565 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001270384 |
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| Protein GI | 148550282 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.117888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.241341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGA TGCGTCCGCT GTCGGTCATC TGTCTGGGGT TGTTGTACAT GCTCACCGGC
TGTAGCAAGG AAGAGGTCCC CAAGACGCTG CCTCGGGTGG GGGTGCAGCA GGTACAACCC
ACCGATTTCG CTGCCAGGGT CACCCTGACC GGCGACGTAC AGGCACGGGT GCAGACCGAT
TTGTCATTCC GCGTCGGCGG CAAGATCATT TCGCGTAGCG TCGACGTAGG TGATCACGTC
AAGGCCAACC AGGTGCTGGC CCGGCTGGAC CCGAAAGACC TGCAGAACAA TGTCGATTCG
GCCAAGGCCG AAGTATTCGC CGCGCAGGCG CGCGTTACCC AGACCAGTGC GGCCTTCGTG
CGCCAGCAAA AACTGCTGCC CAAGGGCTAC ACCAGCCAGA GCGAATACGA TGCTGCCGAA
GCCGCGCTGC GCAGCAACCA GAGCGCACTC AAGGCCGCCC AGGCGCAACT GGCCAATGCC
AACGAGCAAC TCAGCTACAC CGCACTGGTC TCCGAGGCCG CCGGGGTCAT CACCGAGCGC
CAGGCCGAGG TTGGCCAAGT GGTGCAGGCG ACCATGCCGA TCTTCAGCCT GGCCGTCGAT
GGCGACCGCG ATGCGGTGTT CAACGTCTAC GAATCGCTGC TGGTGGCGCC GCCCAGCGAT
GCCGGAGTAG TCGTGAGCCT GCTGGACGAT CCCAAGGTCC AGGCCCGTGG CTTCGTACGT
GAAATCACCC CCACCGTGTC GGCGCAAAGC GGCACCGTGC AGGTCAAGGT GGGGCTCAAG
GACGTGCCGC CCGGGATGCA ATTGGGGGCA CCGGTTACTG CCACCACCAA TGCCCAGGGT
CGGCCCAGCA TCGAGCTGCC ATGGTCGGCG CTGACCAAGG CCTTGCATGA GCCTGCCGTG
TGGGTGGTGG GCGAGGGCGA CAAGGTGGAA CTGCGCAAAG TCAAAATCCG CCGTTACCTC
ACCGGCAAGA TCGTGGTCGC CAGCGGCCTA AAAGCCGGCG AGACCGTAGT GGTCAATGGC
GGCCAGTTGC TGCACCCCGG CATGCAGGTA CAGAAGGTCG ACGCCAAGGG CCCAGGGGGT
GAGCTATGA
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| Protein sequence | MALMRPLSVI CLGLLYMLTG CSKEEVPKTL PRVGVQQVQP TDFAARVTLT GDVQARVQTD
LSFRVGGKII SRSVDVGDHV KANQVLARLD PKDLQNNVDS AKAEVFAAQA RVTQTSAAFV
RQQKLLPKGY TSQSEYDAAE AALRSNQSAL KAAQAQLANA NEQLSYTALV SEAAGVITER
QAEVGQVVQA TMPIFSLAVD GDRDAVFNVY ESLLVAPPSD AGVVVSLLDD PKVQARGFVR
EITPTVSAQS GTVQVKVGLK DVPPGMQLGA PVTATTNAQG RPSIELPWSA LTKALHEPAV
WVVGEGDKVE LRKVKIRRYL TGKIVVASGL KAGETVVVNG GQLLHPGMQV QKVDAKGPGG
EL
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