| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5071 |
|---|
| Symbol | |
|---|
| ID | 5193275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5697060 |
|---|
| End bp | 5699426 |
|---|
| Gene Length | 2367 bp |
|---|
| Protein Length | 788 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640589554 |
|---|
| Product | peptidase S45, penicillin amidase |
|---|
| Protein accession | YP_001270373 |
|---|
| Protein GI | 148550271 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA GCCTGACCCT GCTGGCGGTG GTAGTCACCG TTTCCGCTGG CGCCGCCGGT
TACTGGTACA TGCAGGGGAA GCTGCCGCAG CGCGAGGGCG AGGTCGCCAT TACCGGCCTG
CAAGCGCCGG TCAGCGTGCG CTACGACGCC CGCGGCGTGC CACACCTGCA GGCACAGAGC
GAGCCGGACC TTTACCGTGC ACTGGGCTAC GTGCATGCCC AGGACCGGCT GTTCCAGATG
GAGATTTTGC GCCGCCTGGC CCGTGGCGAA CTGGCTGAGG TGCTCGGCGA CAAGCTGCTG
CCCACCGACA CCCTGTTCCG CAGCCTGCGC ATACGCGAGC AGGCCGCGCT GATGGCCAAG
CGACAGGATC CGCAGGCGCC GGCATGGAAG GCCCTGCAAG CCTACCTCGA GGGGGTCAAC
AGTTGGCAGG CCAGCCACCC CAAGCCCACG GAATTCGACC TGCTCGGCAT CACCCCGCGC
CCGTTCACCG CCGAGGACAC GCTGAGCATC GCCGGCTACC TGGCCTACAG TTTTGCTGCC
GCGTTCCGCA CCGAGCCAGC GCTGACCTAC ATCCGCGACC AGCTGGGGCC TGACTACCTG
AAAATATTCG ACCTTGGCTG GCAACCCGAG GGCGCATTGG GCACGCCACT GGCCGCTGCC
GACTGGCAAA GCCTGGAAGC ACTTGCGCGC TTAAGCAATG ATGCACTGGG CGACGCCGGC
ATCCCGCAGT TCGAAGGCAG CAACGCCTGG GCGGTCGCGG GTAGCCGCAC TCGCAGTGGC
AAACCGTTGC TGGCTGGCGA CCCGCACATC AGCTTCGCCG TACCTGCGGT GTGGTACGAG
GCCGAGCTGT CAGCGCCCGG TTTCAATCTC TACGGCTATT TCCAGGCTCT CAACCCGTTC
GCTCTGCTCG GCCACAACCG TGATTTTGGC TGGAGCCTGA CCATGTTCCA GAACGATGAC
GTCGACCTGA TCGCAGAAAA GACCAACCCT GCCAACGCTG ACCAGGTCAT GGTCGATGGC
CAGTGGCGCA CACTGGAAAA GACCGAGCAG CAGATTGCAA TCAAAGGCGA GCAACCGGTC
ACCATCAACC TGCGCCGCTC ACCCCACGGG CCAATCGTCA ACGAAGTCCT CGGCGCCACG
GCAGGGGCCA CGCCGATTGC CATGTGGTGG GCGTTCCTCG AAACCGAGAA CCCGATCCTC
GAAGGCTTCT ACCAGCTCAA TCGCGCCGAC ACCCTGGGCA AGATGCGCGA AGCGGCTGCC
AAGGTGCAGG CGCCGGGGCT GAACTTCGTC TGGGCCAATG CCCGTGGCGA TATCGGCTGG
TGGGCAGCGG CAAAACTGCC GATTCGCCCG GACGCTGTGA ACCCGGCGTT CATCCTCGAC
GGCGCCAGCA GCCAGGCCGA CAAACCCGGC TTTTACCCCT TCAGCGTCAA CCCGCAACAG
GAGAATCCGG CCAGCGGTTA TATCGTCTCG GCCAACTACC AGCCACCCGC CGTGGTGCCG
ATACCCGGCT ACTACAACCT CGCCGACCGC GGCCGCCAGC TCGATCGCCA GCTGGCCAAC
CCGGAGGTGA AATGGGACAT GCAGAACAGC CAGGCGCTGC AACTCGATAC GGCCAGCGAT
TACGGCCCGC GCACCTTGGC ACCGCTGCTA GCGACGTTGC GTCAGATCGC CCAGGGTGAC
GAGGAAAAGG AACTGGTCGA GCAGTTGGCT GCCTGGCGCG GCGACTATCC ACTGGACTCA
ACCAGTGCCA CGCTGTTCAA CCAGTTCCTC TACGCGCTGG CCTATGCCGC GTTGCATGAC
GAATTGGGCG ATACCTGGTT CCCGGTGCTG ATCAGCACCC GTGCCATCGA TGCCGCGCTG
CCGCGTCTTG CCGCCGATGC CGAGTCGCCC TGGTGGAACA CCCGCGGCGC CAACCAGCGC
ACTGACCGCA GCTCGATCGT GCGCGAAGCC TGGCAGAAGA GCCTTGGCCA CTTGCGCGAC
ACCCTCGGCA AGGACCCAGC CAGCTGGCAG TGGGGCAAGG CCCATACCCT GACCCACAAC
CATCCGCTGG GGGTGAAAAA GCCGCTGAAC CTGCTGTTCA ACGTTGGGCC GTTTGCCGCA
CCGGGTACTC ATGAAGTACC GAACAACCTT TCGGCGAAGA TCGGCCCGGC GCCATGGCCG
GTGACGTACG GGCCGTCGAC GCGGCGGCTG ATCGACTTTG CCGATGCCGG GCAGGCGCTG
ACCAGCAACC CGGTTGGGCA GAGTGGCGTG CCGTTTGACC GCCATTACGC GGACCAGGCC
GAAGGGTATG TGCAGGGGCA GTATCAGAAG GCACAGATGG GGGTAATACC GGCGCAGAGT
ACCTTGCGAT TGGTGCCAGG GCCGTAA
|
|---|
| Protein sequence | MKRSLTLLAV VVTVSAGAAG YWYMQGKLPQ REGEVAITGL QAPVSVRYDA RGVPHLQAQS
EPDLYRALGY VHAQDRLFQM EILRRLARGE LAEVLGDKLL PTDTLFRSLR IREQAALMAK
RQDPQAPAWK ALQAYLEGVN SWQASHPKPT EFDLLGITPR PFTAEDTLSI AGYLAYSFAA
AFRTEPALTY IRDQLGPDYL KIFDLGWQPE GALGTPLAAA DWQSLEALAR LSNDALGDAG
IPQFEGSNAW AVAGSRTRSG KPLLAGDPHI SFAVPAVWYE AELSAPGFNL YGYFQALNPF
ALLGHNRDFG WSLTMFQNDD VDLIAEKTNP ANADQVMVDG QWRTLEKTEQ QIAIKGEQPV
TINLRRSPHG PIVNEVLGAT AGATPIAMWW AFLETENPIL EGFYQLNRAD TLGKMREAAA
KVQAPGLNFV WANARGDIGW WAAAKLPIRP DAVNPAFILD GASSQADKPG FYPFSVNPQQ
ENPASGYIVS ANYQPPAVVP IPGYYNLADR GRQLDRQLAN PEVKWDMQNS QALQLDTASD
YGPRTLAPLL ATLRQIAQGD EEKELVEQLA AWRGDYPLDS TSATLFNQFL YALAYAALHD
ELGDTWFPVL ISTRAIDAAL PRLAADAESP WWNTRGANQR TDRSSIVREA WQKSLGHLRD
TLGKDPASWQ WGKAHTLTHN HPLGVKKPLN LLFNVGPFAA PGTHEVPNNL SAKIGPAPWP
VTYGPSTRRL IDFADAGQAL TSNPVGQSGV PFDRHYADQA EGYVQGQYQK AQMGVIPAQS
TLRLVPGP
|
|---|
| |