| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5068 |
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| Symbol | |
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| ID | 5192219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5694651 |
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| End bp | 5695637 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589551 |
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| Product | lysophospholipase-like protein |
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| Protein accession | YP_001270370 |
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| Protein GI | 148550268 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.529174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGG CCAGAGCTGA AGATTCCAGA TCAATACTTG CATCAATGTG GATGTACCCG
ATGCCCCCTG CCTTTCACCC CGACTGCCTG CGCACCAGCC TGGCGCCGTT CACCACTCGC
CAGCCACTGT CGGCACAAGC GCAGGACTAC CAGCGCTTCT ATGGCCTGGA CCTGCCGGCA
CACAGCTGGC TGGGCGGCTT CCAGGCGGCG GGGTTCGACC TGGTCGGGCA GGCCTGGCTA
CCCGAGCAGC CCAGCGCGAC GTTGTTCCTG CTGCACGGCT ATTACGACCA CATGGGCCTC
TACCAGCATG TGATTGCGTG GGCACTCAAG CAAGGTTTTG CGGTGATCAG TTGCGACCTG
CCCGGCCACG GCCTGTCCAG CGGCGAGCGG GCCAGCATCA CTGACTTCGC GGTGTACCAG
CAGGTGCTGG AGGCCTTGTT CGAACAGGCG CACACGCTGC AACTGCCGCA CCCGTGGCAC
CTTTGTGGGC AGAGCACGGG GGGGGCGATT GCCGTGGACC ATCTGCTGCA CCAGGGCGCA
CGCAGCCCCG TCGATGGCCA GGTCATCCTG CTGGCCCCGC TGGTGCGGCC ATGTTCCTGG
CGCTGGTCGA AGTTCAGTTA TTGCGTGCTG CGCCACTTCG TCAATGGCAT CGAACGGCGC
TTCAGTGAGA ACACCAACGA CCCGGCCTTC CTGCCGTTCC TGGAGGCCGA CCCGCTGCAA
CCGCGTCGCC TGCCAACGGC CTGGGTGGGC GCACTGATCG CCTGGGTCAA ACGCATCGAG
GCCGCGCCGC GCAGTGCGCG TCGGCCATTG ATCGTGCAGG GGGAGGCAGA TGGCACGGTG
GACTGGCCCT ACAACCTCGA AGTGCTCAAG GCCAAGTTTG CCGAGCCACA GATCCTGATG
CTGCCCGAGG CCCGTCACCA CCTGGCCAAC GAGTTGCCGG GCATCCGCCA GCGCTACTTC
GACTTCATCG ACCAGCGCCT GGGCTGA
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| Protein sequence | MAPARAEDSR SILASMWMYP MPPAFHPDCL RTSLAPFTTR QPLSAQAQDY QRFYGLDLPA
HSWLGGFQAA GFDLVGQAWL PEQPSATLFL LHGYYDHMGL YQHVIAWALK QGFAVISCDL
PGHGLSSGER ASITDFAVYQ QVLEALFEQA HTLQLPHPWH LCGQSTGGAI AVDHLLHQGA
RSPVDGQVIL LAPLVRPCSW RWSKFSYCVL RHFVNGIERR FSENTNDPAF LPFLEADPLQ
PRRLPTAWVG ALIAWVKRIE AAPRSARRPL IVQGEADGTV DWPYNLEVLK AKFAEPQILM
LPEARHHLAN ELPGIRQRYF DFIDQRLG
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