Gene Pput_5066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5066 
Symbol 
ID5194207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5693152 
End bp5693787 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID640589549 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001270368 
Protein GI148550266 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG CCATGCACAT ATCCCCTGAA CACCCGATGC TTGCGGCCGT CGTCGACGAT 
CTGGCCACCC ATGGCTGGTC CCAGCAGGCG CACTTTCTGC CTGCCGACCT GGTGCGCGCG
CTGGCGGCCG AGTGCCGGCG CCGTGATGCC GAAGGCGAAC TGAACCCCGC AGGGGTTGGG
CGGGGTGCTA CCCAGGAGGT GCGCGAAACC ATTCGCGGTG ACCAGATCCA GTGGATCGAC
TCGGGGCAGG CCGAGGCCTG CGACCTGTAC CTGGCGGCGA TGGATCAGCT GCGCCTGGCA
ATCAACCAAG GCCTTTTCCT GGGCCTGGAA GACTTTGAAT GCCACTTTGC CCTGTACCCA
CCGGGGGCGT TCTATCGCCG GCACCTGGAC CGCTTCCGCG ACGATGACCG GCGCATGGTC
TCGGCGGTGC TTTACCTCAA TGAAGGCTGG CAACCGCATG ACGGTGGCCA GTTGCGTATG
TTCCTGGCCG ACGGTGTCGA GCACGATGTT GAGCCAGTGG CCGGTTGCCT GGTGGTATTC
CTGTCGGGCG AAGTGCCTCA CGAAGTCCTG CCGGCCGGGC GTGAGCGGCT GTCATTGACC
GGCTGGTTCA GGCGGCGTGG CAATGACCCG TTCTGA
 
Protein sequence
MMRAMHISPE HPMLAAVVDD LATHGWSQQA HFLPADLVRA LAAECRRRDA EGELNPAGVG 
RGATQEVRET IRGDQIQWID SGQAEACDLY LAAMDQLRLA INQGLFLGLE DFECHFALYP
PGAFYRRHLD RFRDDDRRMV SAVLYLNEGW QPHDGGQLRM FLADGVEHDV EPVAGCLVVF
LSGEVPHEVL PAGRERLSLT GWFRRRGNDP F