Gene Pput_5064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5064 
Symbol 
ID5194799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5691983 
End bp5692471 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID640589547 
Producthypothetical protein 
Protein accessionYP_001270366 
Protein GI148550264 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGA CCATAGGGGT ACTGCTGGCA GTACTGATCA GTCCATTGGC TCAGGCAGAG 
CTGATCGACG AAATCGCCGA CCGGGGCGAA CTGCGCATTG CCGTACAGGC CGAGAACTCG
CCATACGCCT TCAAACAAGA CGACCACCTG ACAGGTTTCG ACATCGAATT TGGCCAGGCC
CTGGCCAAGG AACTGGACTT GCGCGCCGAG TTCGTCGAAG CCCCGTCTGC CGAAGTGCTG
GCGGGTGTCG AGAGTGGCAA GTACGACATC GCGTTCGCCC CGTCGAGTGA ATCGCTCACA
GACGACGGCC CGCTCGATGT AAGCCTGCCG ATTGGCGAGA AGAAGCTGGT GATCCCGTTT
CAGAAGGACA ACCCGGCTTT TGAAAGCGCC GTAAACAATG CGTTGCAGCG CTTGAAAGAC
AATGGCCGGA CTGCCGAGCT TGAGCAGAAG TGGTTCAAGG GTGTGCAGGA GACTGCAGGC
GGGCAGTGA
 
Protein sequence
MRSTIGVLLA VLISPLAQAE LIDEIADRGE LRIAVQAENS PYAFKQDDHL TGFDIEFGQA 
LAKELDLRAE FVEAPSAEVL AGVESGKYDI AFAPSSESLT DDGPLDVSLP IGEKKLVIPF
QKDNPAFESA VNNALQRLKD NGRTAELEQK WFKGVQETAG GQ