Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5064 |
Symbol | |
ID | 5194799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5691983 |
End bp | 5692471 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640589547 |
Product | hypothetical protein |
Protein accession | YP_001270366 |
Protein GI | 148550264 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGA CCATAGGGGT ACTGCTGGCA GTACTGATCA GTCCATTGGC TCAGGCAGAG CTGATCGACG AAATCGCCGA CCGGGGCGAA CTGCGCATTG CCGTACAGGC CGAGAACTCG CCATACGCCT TCAAACAAGA CGACCACCTG ACAGGTTTCG ACATCGAATT TGGCCAGGCC CTGGCCAAGG AACTGGACTT GCGCGCCGAG TTCGTCGAAG CCCCGTCTGC CGAAGTGCTG GCGGGTGTCG AGAGTGGCAA GTACGACATC GCGTTCGCCC CGTCGAGTGA ATCGCTCACA GACGACGGCC CGCTCGATGT AAGCCTGCCG ATTGGCGAGA AGAAGCTGGT GATCCCGTTT CAGAAGGACA ACCCGGCTTT TGAAAGCGCC GTAAACAATG CGTTGCAGCG CTTGAAAGAC AATGGCCGGA CTGCCGAGCT TGAGCAGAAG TGGTTCAAGG GTGTGCAGGA GACTGCAGGC GGGCAGTGA
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Protein sequence | MRSTIGVLLA VLISPLAQAE LIDEIADRGE LRIAVQAENS PYAFKQDDHL TGFDIEFGQA LAKELDLRAE FVEAPSAEVL AGVESGKYDI AFAPSSESLT DDGPLDVSLP IGEKKLVIPF QKDNPAFESA VNNALQRLKD NGRTAELEQK WFKGVQETAG GQ
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