| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5057 |
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| Symbol | |
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| ID | 5193485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5684850 |
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| End bp | 5685524 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589540 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_001270359 |
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| Protein GI | 148550257 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0837003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGG ACCAACTCAA ACAGGCCGTC GCCCAGGCCG CTGTCGACTT CATTCTGCCC
AAGCTGGATG AAAAGAGCGT CGTAGGCGTC GGTACCGGTT CGACCGCCAA CTTCTTCATC
GATGCCCTGG CTCAGCACAA GACCGCGTTC GACGGCGCAG TCGCCAGCTC CGAAGCCACT
GCCCAGCGCC TGAAGGGCCA TGGCATCCCG GTCTACGAAC TGAACAGCGT CAGCGAGCTT
GAGTTTTACG TGGACGGTGC TGACGAGAGC GACGCACACC TGCACCTTAT CAAGGGCGGC
GGCGCAGCCC TGACCCGCGA AAAGATCGTC GCGGCCGTGG CCAAGACCTT CATCTGCATC
GCCGACGGCA GCAAGCTGGT GCCGGTACTG GGGGCCTTCC CGCTGCCGGT CGAAGTAATC
CCCATGGCCC GCAGCCACGT GGCACGTCAG CTGGTGAAGC TGGGTGGTGA CCCGGTGTAC
CGTGAAGGCG TGGTCACCGA CAACGGCAAC GTGATCCTGG ATGTGTACAA CCTGCAGATC
ACCAACCCGG TGGAGCTGGA AGCACAGATC AACGCCATCG TCGGCGTGGT GACCAACGGC
CTGTTCGCGG CGCGGCCGGC GGATCTGCTG CTGCTGGGTA CCGCTGAAGG CGTGAAGAGC
CTGAAGGCCG AGTAA
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| Protein sequence | MTQDQLKQAV AQAAVDFILP KLDEKSVVGV GTGSTANFFI DALAQHKTAF DGAVASSEAT
AQRLKGHGIP VYELNSVSEL EFYVDGADES DAHLHLIKGG GAALTREKIV AAVAKTFICI
ADGSKLVPVL GAFPLPVEVI PMARSHVARQ LVKLGGDPVY REGVVTDNGN VILDVYNLQI
TNPVELEAQI NAIVGVVTNG LFAARPADLL LLGTAEGVKS LKAE
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