Gene Pput_5031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5031 
Symbol 
ID5192254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5658492 
End bp5658920 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content57% 
IMG OID640589516 
Productputative prophage repressor 
Protein accessionYP_001270335 
Protein GI148550233 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.916136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACTG TTCTCGGCAC CCTCGACCCT AGCACTACCG ACCTACCGCT GTATTCATTT 
CAGGTGCCTG CAGGCTTTCC ATCTCCGGCA GCAGATCACT TAGAAAAACG CATTTCTCTC
GACGAACTGT TGGACGTCCG GGCACCTCAC ATCTACCTGG TGCGCGTCGA AGGTGACTCG
ATGATCGGGG CGGGAATTTA TCCAGGCGAC CTTGTCCTGG TCGACCGATC CATTTCGCCA
GAGCCAGGCC ACATCGTAAT CGCCGCTGTA AACTGCGAGC CCCTTTGCAA ACGCCTGGCC
CGCGAAGGCA GCCAAGTGGT GCTGCGGTCG GAAAATCCCC GCTATTCCTC AAGGTATCTC
CTTGAAGGCG AGGAGCTCGA GATCTGGGGT GTGGTGACCT ACAGCGTGCG CAGCCATGCC
AAGCTCTGA
 
Protein sequence
MITVLGTLDP STTDLPLYSF QVPAGFPSPA ADHLEKRISL DELLDVRAPH IYLVRVEGDS 
MIGAGIYPGD LVLVDRSISP EPGHIVIAAV NCEPLCKRLA REGSQVVLRS ENPRYSSRYL
LEGEELEIWG VVTYSVRSHA KL