| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5030 |
|---|
| Symbol | |
|---|
| ID | 5192253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5657225 |
|---|
| End bp | 5658505 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640589515 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_001270334 |
|---|
| Protein GI | 148550232 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCT CTGATCGTGT CTTCGCTCTC ATCGACTGCA ACAGCTTTTA CGCCAGCTGC
GAGCGGGTGT TCCGGCTCGA CTTGCGGCAC AAGCCCGTCG TTGTCCTGAG CAACAACGAC
GGCTGCGTGA TAGCCCGCTC GGCAGATGCC AAGCCGTGGA TCAAGATGGG TGAGCCCTAC
TTCCAGATCA AGGACAAGCT CCGCAAGCAC GGTATCGTGG CGTGCTCGTC CAATTACCAG
CTTTACGGTG ACATGTCCGA ACGCGTCATG ACCGTCATCG AGTCCATGGT GCCGGCGTCC
GAGGTCTACA GCATCGACGA AGCATTCGCC GACCTGACTG GCATGCCGGG AGATCTTGAG
CTGCTTGGCA GGAAGATCCG AGCGGAGGTG TATCGTCGTA CCGGCATACC GGTGGGTGTT
GGCATCGCAT TAACAAAGAC CTTGGCCAAG CTGGCTAACC ATGCGGCGAA ACAATGGCAG
AGCTACACGG GTGGCGTCGT CGATCTTCGT GACAAGATCA AGCGCGACTG GGTGCTCAAA
AAGTGCGATG CGTCTGACGT CTGGGGTATT GGACGACGTA TGTCGGCGCA CCTGGAGGCG
ATGGGCATCC GTACCGCCTG GGAGTTGGCC CATGCAGACG CTTGGACGCT GAGGAAGAAA
TTCAGTGTCG TGGTCGAAAA GACAGCCCGA GAACTCGCAG GCACCACTTG CTTGGATTTG
GACGAGCCGA ACCCGCCAAA GCAGGAAATT TGCTGCAGCA GGATGTTCGG CCAGCGCCTG
ACCGACCTCG CTCCCATCAA GGAAGCTGTT TCAACCTACG CCTCACGTGC CGCTGAGAAA
CTGCGGGCCC AGGAGTCGTT GTGCAAGCGC ATTCGAGTCA GCATCCGCAC AGGAATGTTC
AACCCTGACG AGGCCAAGTA CGCGAATGGT GTGATTGTTG AGCTGCCGTA TCCCACCGAT
GACACTCGTC TGCTCACCAA GGCTGCCCAG GAGGGCGTAG AGCGCGTTTA CCGTGAAGGC
TTTCGATACA GCAAGGCAGA AGTGCTGCTG CTAGACCTGA GCAAGCGTGG GGAAATTACG
GGTGATCTGT TCGCAGCAGC TCAACCGGTG GCCAGTGAAA AACTCATGGG GGTGCTGGAC
ACCGTGAACG CCCGCTGGGG ACGTGGCACC ATGCGCCTGG CCAGTGTGCC GGTCGACCCT
TTCTGGGGCA TGCGGCGCGA GATGATGAGC CAAAGCTACA CCACAAAAAT GGACGAGCTC
TGGACTGTGT ATTGCAAGTG A
|
|---|
| Protein sequence | MPSSDRVFAL IDCNSFYASC ERVFRLDLRH KPVVVLSNND GCVIARSADA KPWIKMGEPY
FQIKDKLRKH GIVACSSNYQ LYGDMSERVM TVIESMVPAS EVYSIDEAFA DLTGMPGDLE
LLGRKIRAEV YRRTGIPVGV GIALTKTLAK LANHAAKQWQ SYTGGVVDLR DKIKRDWVLK
KCDASDVWGI GRRMSAHLEA MGIRTAWELA HADAWTLRKK FSVVVEKTAR ELAGTTCLDL
DEPNPPKQEI CCSRMFGQRL TDLAPIKEAV STYASRAAEK LRAQESLCKR IRVSIRTGMF
NPDEAKYANG VIVELPYPTD DTRLLTKAAQ EGVERVYREG FRYSKAEVLL LDLSKRGEIT
GDLFAAAQPV ASEKLMGVLD TVNARWGRGT MRLASVPVDP FWGMRREMMS QSYTTKMDEL
WTVYCK
|
|---|
| |