| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5025 |
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| Symbol | |
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| ID | 5193091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5652897 |
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| End bp | 5654087 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640589510 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001270329 |
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| Protein GI | 148550227 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.422666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTC TCAACGGACT TCGGGTGATC GAGATCGGTA CGCTCATTGC GGCACCGTTT
GCTGCCCGCA TGATGGCCGA ATTCGGCGCC GAAGTTATCA AGATCGAATC CTTGGGGCAG
GGAGACCCTC TTCGTAAATG GCGAAAACTA CACGAAGGGA CGTCGCTGTG GTGGTACCTG
CAATCCAGGA ACAAAAAGTC GATTGCATTG AACCTGAAGT CAGCGTTTGG CATTGACATC
GTTAAGCAGC TGGTTGAGAG CGCTGATGTT CTCATTGAGA ACCTGCGCCC TGGCGCGCTG
GAAAAATTGG GCCTCGGTTG GGATGTGCTC CACGCATTAA ATCCAAAACT GACGCTGGTG
CGCATCTCAG GTTACGGCCA ATCGGGCCCT TACCGAGATC GTCCCGGCTT TGGTGCCATC
GGTGAAGCCA TGGGAGGTAT CCGCTATACC ACCGGTACTC CCGGCATTCC ACCAGCCCGT
GTCGGAGTAA GCTTGGGTGA CTCGCTGGCC TCCATGCACG CCGTAATTGG TGCGCTCATG
TCCGTGTTGC GGGTCAAGAC GGGCCAAGGT GACGGGCAGG TAGTTGATGT ATCCCTCGCA
GAAAGCGTCT TCAATGTGAT GGAAAGCTTG GTGCCTGAAT ACGACATGCT TGGCCATGTT
CGTGAGCGTA GCGGTGGTGC ATTGCCAGGC ATCGCCCCAT CCAACACTTA CCCGACGGCA
GACAATGGGT ACGTAGTCAT CGCAGGTAAC AGCGATCCGA TTTACAAGCG CTTGATGACT
ACGATTGGTC GGCCAGATCT GGCGAATGAC CCGGCGCTTG AACACAACGA TGGTCGAGCC
GCTCAGTGCG AGCTTCTGGA TGAGGCAATC ACTCAGTGGA GCTCCAAGCT GCCGATCGAT
GCCGTACTTG AAGCCTTGGA AAAGGCGGAG GTTCCTGCAG GCCGCATCTA CTCCGTAGCG
GATATCGTGG CTGACCCGCA CTACCAGGCG CGCGACATGA TTTTGAATGC GGAGCTTCCT
GGCGGGGCTA CCGTGAAAAT GCCGGGGATC GTACCGAAAC TGTCCGACAC TCCAGGCCGT
ATCAATTGGC AGGGGCCAAG CCTTGGGCAG CACACGCAGT CCGTTCTCGG TGATCTGGGT
TTGCCTGACG AGATGATCAA ACGCCTCAAG GATGAGGGGG TAGTGCAATG A
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| Protein sequence | MTALNGLRVI EIGTLIAAPF AARMMAEFGA EVIKIESLGQ GDPLRKWRKL HEGTSLWWYL
QSRNKKSIAL NLKSAFGIDI VKQLVESADV LIENLRPGAL EKLGLGWDVL HALNPKLTLV
RISGYGQSGP YRDRPGFGAI GEAMGGIRYT TGTPGIPPAR VGVSLGDSLA SMHAVIGALM
SVLRVKTGQG DGQVVDVSLA ESVFNVMESL VPEYDMLGHV RERSGGALPG IAPSNTYPTA
DNGYVVIAGN SDPIYKRLMT TIGRPDLAND PALEHNDGRA AQCELLDEAI TQWSSKLPID
AVLEALEKAE VPAGRIYSVA DIVADPHYQA RDMILNAELP GGATVKMPGI VPKLSDTPGR
INWQGPSLGQ HTQSVLGDLG LPDEMIKRLK DEGVVQ
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