| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5022 |
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| Symbol | |
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| ID | 5191191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5648863 |
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| End bp | 5650266 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640589507 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_001270326 |
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| Protein GI | 148550224 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA TTACCCTCTT CGAAAAACTC TGGCGTCGCC ATGCAGTTCT TGATACAGAT
GATGGCCAGA CTTTATTATA CATTGACCTG CAGTTGATCA ATGAAGTCAC AAGTCCGCAG
GCGTTCGATG CACTGCGAAT GAATGGTCTC AGTCCATGGC GTGTAGATTC TGTGTTGGCT
ACTGCTGATC ATAACGTTCC GACCAAGGAT CGGCCTAAAG GCATTACGGA CGATATTGCT
CGTCGTCAAG TTCAGGCACT TGAGCGGAAC TGCGAAGAAT TCAACCTCAC GCTTTTCGGT
ATGGACGATC ATCGTCAAGG GATTCTCCAT GTGATTGGCC CTGAGCAAGG GGTTACCCTT
CCTGGAATGT CGATCGTGTG CGGCGACTCT CACACAACGA CCCATGGTGC ATTTGCTGCA
CTCGCTTTTG GAATTGGTAC CTCGGAAATT GAGCACGTTC TGGCCACTCA ATGCCTTTCG
ATGAGAAAGC TCAAAAGCAT GCGTATCACC ATCGAGGGCG TGCTTAATCC CTACATAACG
TCGAAGGATC TCGCATTAGC ACTGATCGGG AGAATAGGTA CCGCCGGAGC GACGGGGTAT
GCCATTGAGT TTGCAGGTTC CACGGTCGAG CGCATGACGA TGGAAGCACG CATGACACTG
TGCAACCTAG CAATTGAGGC AGGCGCACGT TGTGCCATGG TGGCATTCGA CGATACGACA
GCTGCTTACA TCCGAGGAAA GCCGATGGCA CCGATAGGGC AGCGGTGGAA TGACGCCGAA
CGCTATTGGC GTACCCTCAG CACTGATGTC GGGGCGGTCT TCGACGTAGA AGTCCATATG
GATGCGAGCT CTATCAGACC GCACGTTACT TGGGGAACCT CTCCGGAAAT GGTCGTGGAT
ATCAACGGAC GCGTTCCATC CCCGCAGGAA GAACTTGATC CAGTTAAACG ACAAAGTATT
GAGCGCGCCT TGAGGTATAT GGATTTGGAG CCGGATACGG CAATCAAAGA CATCTTTCTG
GACAAGGTTT TCATTGGGTC GTGCACGAAC TCTCGAATCG AGGATCTTCG TCTAGCGGCG
TCTGTTGTAG CAGGAAAAAA GGTAGCCAAA AATATTAAAC AGGCGCTAGT CGTTCCAGGC
TCCGGTTTGA TCAAAAAACA GGCTGAGTCG GAAAAGCTTG ATCGTATTTT CATTGATGCC
GGCTTTGAGT GGCGGGACGC CGGATGCTCA ATGTGCCTGG GTATGAACGA GGACAGGCTG
GCCGCTGGGG AGCGTTGTGC CTCGACCTCA AATCGGAACT TTGAAGGGCG ACAGGGGGCC
GGTGGTCGGA CTCATCTTGT TAGTCCAGCA ATGGCAGCTG CTGCAGCAAT CGCCGGTCAC
TTTGTCGATA TTGGAGAGGT ATAA
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| Protein sequence | MNPITLFEKL WRRHAVLDTD DGQTLLYIDL QLINEVTSPQ AFDALRMNGL SPWRVDSVLA
TADHNVPTKD RPKGITDDIA RRQVQALERN CEEFNLTLFG MDDHRQGILH VIGPEQGVTL
PGMSIVCGDS HTTTHGAFAA LAFGIGTSEI EHVLATQCLS MRKLKSMRIT IEGVLNPYIT
SKDLALALIG RIGTAGATGY AIEFAGSTVE RMTMEARMTL CNLAIEAGAR CAMVAFDDTT
AAYIRGKPMA PIGQRWNDAE RYWRTLSTDV GAVFDVEVHM DASSIRPHVT WGTSPEMVVD
INGRVPSPQE ELDPVKRQSI ERALRYMDLE PDTAIKDIFL DKVFIGSCTN SRIEDLRLAA
SVVAGKKVAK NIKQALVVPG SGLIKKQAES EKLDRIFIDA GFEWRDAGCS MCLGMNEDRL
AAGERCASTS NRNFEGRQGA GGRTHLVSPA MAAAAAIAGH FVDIGEV
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