Gene Pput_5013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5013 
Symbol 
ID5192920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5637096 
End bp5637539 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID640589498 
ProductMerR family transcriptional regulator 
Protein accessionYP_001270317 
Protein GI148550215 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG GAGAACTGGC CAAAGCCACC GACTGCGCGG TGGAAACCAT CCGCTACTAC 
GAGCGTGAAA ACCTGCTGCC AGAGCCGGCG CGCAGCGAGG GCAACTACCG GTTGTACACC
CAGGCCCATG TGGAGCGGCT GACCTTCATC CGCAACTGCC GCACGCTGGA CATGACCCTG
GACGAAATTC GCAGCCTGCT ACGCCTGCGC GACAGCCCCG ACGACGCGTG CGGCAGCGTC
AATGCGCTGA TCGACGAGCA TATCGAGCAT GTTCAGGCGC GGATCGATGG CTTGGTGGCA
TTGCAAGAGC AGCTGGTGGA GCTGCGGCGG CGCTGCAACA CGCAGGGGAG TGAATGCGCG
ATCTTGCAGC AACTGGAGAC AAACGGGGCG GTATCGGTGC CGGATACCGA ACATTCGCAT
GTGGGGCGGA GTCACGGGCA TTGA
 
Protein sequence
MKIGELAKAT DCAVETIRYY ERENLLPEPA RSEGNYRLYT QAHVERLTFI RNCRTLDMTL 
DEIRSLLRLR DSPDDACGSV NALIDEHIEH VQARIDGLVA LQEQLVELRR RCNTQGSECA
ILQQLETNGA VSVPDTEHSH VGRSHGH