| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5010 |
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| Symbol | |
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| ID | 5192363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5632591 |
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| End bp | 5633649 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589495 |
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| Product | ABC transporter related |
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| Protein accession | YP_001270314 |
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| Protein GI | 148550212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.118547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA CCACCCCCGG CGCACAGATA AAAGTGTGCA ACATCCACAA GCGCTTCGGT
GCCTTTACGG CGCTCAACGA TGTCTCGCTG GACATCGCCG CGGGCGAACT GGTGTGCCTG
CTCGGCCCGT CCGGTTGTGG CAAGACCACG CTGCTGCGCT GCATTGCCGG CCTGGAGCGC
CAGGACCGCG GTACGCTGTA CATCGGCGAA CGCGATATCT CCAAGCTGTC ACCCCAGGCG
CGGGACTACG GCATCCTGTT CCAGTCCTAT GCGCTGTTTC CCAACCTTAC CGTCGAAGCC
AATATCGCCT ATGGCCTGAC GGGCAGTGGT CGCGAGCAGG CCCGTCAGCG GGTGGCCGAA
ATGCTCGAAC TGGTTGGCCT GTCTGGCAGC GAGAAGAAGT ACCCAGGCCA GCTCTCCGGT
GGCCAGCAGC AACGTGTGGC CTTGGCCCGC GCGCTGGCAC CGTCGCCATC GCTGCTGCTG
CTCGATGAGC CGATGTCGGC GCTGGACGCC CGGGTGCGCG AGCACTTGTG CACCGAACTG
CGTCAGCTGC AGCGCCAACT GGGCATCACC ACGTTGATGG TTACCCACAA CCAGGACGAG
GCCATGTTGA TGGCCGACCG CATTGCGGTG ATGAACAACG GCCAGGTCGA GCAGTACGCC
ACCCCGCAGG AAATCTATGA CCACCCGGCC ACGCCGTTCG TGGCCGAGTT CGTCGGCCAG
GGCAACTGGC TGCCGTTCCA ACGCCGCAGC GACAGCCATG CCCTGGTCGG GGACATGAAC
ATGCGCCTGG CGCCGGGTTC AGCCCAGGCC AGCAGTGGCC GGCTGTTCTG CCGCCCGGAG
GCGATCACGG TCAACCCGGT GGTGCACGAA GAAAACCTGT TCCCGGCCAT GGTCCGCGAA
ATCACCTTCC TCGGTAACCG CTGCCGCATG AGCTTTGAAC TCAAGGCCCT GCCAGGCCAT
GCCCTGCTGG CCGAACTGGC ACCCGAGGCC ATGCCGCGCC TGGGTTCGCA GGACATCTGG
GTGGCGTTGC CGCCGCAGAG CCTGCAGGTG TTTGCCTGA
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| Protein sequence | MNHTTPGAQI KVCNIHKRFG AFTALNDVSL DIAAGELVCL LGPSGCGKTT LLRCIAGLER
QDRGTLYIGE RDISKLSPQA RDYGILFQSY ALFPNLTVEA NIAYGLTGSG REQARQRVAE
MLELVGLSGS EKKYPGQLSG GQQQRVALAR ALAPSPSLLL LDEPMSALDA RVREHLCTEL
RQLQRQLGIT TLMVTHNQDE AMLMADRIAV MNNGQVEQYA TPQEIYDHPA TPFVAEFVGQ
GNWLPFQRRS DSHALVGDMN MRLAPGSAQA SSGRLFCRPE AITVNPVVHE ENLFPAMVRE
ITFLGNRCRM SFELKALPGH ALLAELAPEA MPRLGSQDIW VALPPQSLQV FA
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