| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5009 |
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| Symbol | |
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| ID | 5190323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5630865 |
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| End bp | 5632589 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589494 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001270313 |
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| Protein GI | 148550211 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR03262] putative 2-aminoethylphosphonate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC CAATGTCCCT GCCGTTGAGC CAGGCCAACG TCGCGCCGCG TGCTGGCATC
GCCCTGGGTG ACCGGCTGTT CGTCATCGGC GGCAAGAGCC TGCTGCTGAT TCTGTTGGTG
CTGGCCGTGC TGATGCCGTT GCTGGCGATC TTCTGGCGTG GTTTCAGCGG TGAAGCGGGC
CAGGGCGGTG GCTTGCTGGC GGCCCGTGAA TTGTTCACCA GCGCCAGCTT CCATTGGTTG
CTTGGCAACA GCCTGTCGGT GGCCTTCACT GTCGCGGCCA TTGTGGTACC GCTGGCCTAT
TTGTTCGCCT TTGCCCTGCA ACGCACGTTG ATCCCGGCCA AGGGCCTGTG GCGGGGGATT
TCGCTGCTGC CATTGCTGGC ACCGTCGATG CTGCCGGCGA TCGCCCTGGT CTACCTGTTT
GGCAATCAGG GCCTGCTGCG TGGGTTGCTC AGCGACAATA TCTACGGCTT CTGGGGCATC
GTGCTGGGCG AGGCCATCTA CACCTTCCCG CATGCGCTGA TGATTCTGCT GTCGGCACTG
TCACTGGCCG ATGCTCGCCT GTTCGATGCG GCCTCCAGCA TGGGGGCAGG CTCGTGGCGG
GCGTTCACCA GCATCACCTG GCCAGCCTCG CGCCAGGCAG TATTCGCGGC GTTCTGCCTG
GTATTCACGC TGACTATCAC AGACTTCGGT GTACCGGTCG TGGTGGGGGG CGACTATCAA
GTGCTGGCGC TGGAAGCCTA CAAGGCGGTG GTGGGCCAGC AACAGTTCGG CCGTGGTGCG
CTGATCGGCA TGGTGCTGCT GTTGCCGGCC CTGTTCAGCT TTACCGTCGA CGCCTGGCTG
CGTAGACGCC AGGGCGACAC CATGGGTGGC CGTGCGCAGG TGTTCGAACC CAAGCCATCA
CGCGGTCGTG ATGCCTGCTT CCTGACCATT GTGCTGCTGG TGTGCGCGGC GTTGCTGGTG
GTGATCGGTA TGGCGGTGTA CTCCTCGCTG GTCACTTTCT GGCCCTACAA CCTGTCGTTG
TCGCTGCGCC ACTACCTGTT CGAAGACACT GCCGGTGGCG GCTGGCTGGC CTACCGCAAT
AGCGTGACCA TGGCCATTGG CACCGCACTG ATCGGCAGCA TCGTGATCTT CACCGGTGCC
TTCCTGATGG AGAAGACCCA GGGCCAACGC CTGCTCAACC ATGCGCTGCG CCTGCTCAGC
TTCATCCCCA TGGCCGTGCC GGGCCTGGTG CTGGGCCTGG GCTACGTATT CTTCTTCAAC
CTGAACGGTA ACCCGCTGCA TGTGCTGTAC GGCGGCATGG GGTTGCTGGT GGTGTGCACC
ATTGCCCATT ACCTGACCAC CGCGCAGATG ACCGCGACCA CCGCCCTGCG CCAGCTCGAC
GGCGAGTTCG AGGCTGCCGC GATGTCGCTG AAAGCGCCGC TGTACAGGCA CTTCCTGCGC
GTGACCGTGC CGATTTGCCT GCCGGCACTG CTGGACATCA TCCGCTACCT GTTCGTATCG
GCAATGACCA CCGTGTCGGC AGCGATTTTC CTGTACAGCC CCGACACCCT CCTGGCTGCC
GTTGCCGTGC TGAACATGGA CGACGCCGGC AACGTTGGCG GTGCCGCCGC CATGTCCACC
TTGATCCTGC TGACCAGTGC CGGCGCTTCA CTGTTGCTGG CTGCAGCCTC GCGCGGCCTG
CTGCGCCGCT CCCAAGCCTG GCGCCAACGC GCCGCGACCG TCTGA
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| Protein sequence | MAAPMSLPLS QANVAPRAGI ALGDRLFVIG GKSLLLILLV LAVLMPLLAI FWRGFSGEAG
QGGGLLAARE LFTSASFHWL LGNSLSVAFT VAAIVVPLAY LFAFALQRTL IPAKGLWRGI
SLLPLLAPSM LPAIALVYLF GNQGLLRGLL SDNIYGFWGI VLGEAIYTFP HALMILLSAL
SLADARLFDA ASSMGAGSWR AFTSITWPAS RQAVFAAFCL VFTLTITDFG VPVVVGGDYQ
VLALEAYKAV VGQQQFGRGA LIGMVLLLPA LFSFTVDAWL RRRQGDTMGG RAQVFEPKPS
RGRDACFLTI VLLVCAALLV VIGMAVYSSL VTFWPYNLSL SLRHYLFEDT AGGGWLAYRN
SVTMAIGTAL IGSIVIFTGA FLMEKTQGQR LLNHALRLLS FIPMAVPGLV LGLGYVFFFN
LNGNPLHVLY GGMGLLVVCT IAHYLTTAQM TATTALRQLD GEFEAAAMSL KAPLYRHFLR
VTVPICLPAL LDIIRYLFVS AMTTVSAAIF LYSPDTLLAA VAVLNMDDAG NVGGAAAMST
LILLTSAGAS LLLAAASRGL LRRSQAWRQR AATV
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