| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5002 |
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| Symbol | |
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| ID | 5195013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5621304 |
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| End bp | 5623145 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589487 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001270306 |
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| Protein GI | 148550204 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.138711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT ATCGTTCCAA GACTTCCACC CAAGGCCGCA ACATGGCCGG CGCCCGTGCC
CTGTGGCGCG CCACCGGGAT GAAGGACGAA GACTTCAAGA AACCGATCAT CGCCATCGCC
AACTCGTTCA CCCAGTTCGT TCCGGGCCAC GTGCACCTGA AGGACCTGGG CCAGCTGGTG
GCTCGCGAAA TCGAACGCGC CGGTGGCGTG GCCAAGGAAT TCAACACCAT CGCGGTTGAT
GACGGCATCG CCATGGGCCA CGACGGCATG CTGTACTCGC TGCCAAGCCG CGAAATCATT
GCCGACGCGG TGGAGTACAT GGTCAATGCG CACTGCGCTG ACGCCATCGT CTGCATCTCC
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCGCCC TGCGCCTGAA CATCCCGGTG
ATCTTCGTTT CCGGCGGCCC GATGGAAGCC GGCAAGACCA AGCTGGCCAG CCACGGCCTG
GACCTGGTCG ATGCCATGGT CATCGCGGCC GACTCCACGG CCTCCGACGA AAAAGTCGCC
GAATACGAGC GCAGCGCCTG CCCGACCTGC GGTTCGTGCT CCGGCATGTT CACCGCCAAC
TCGATGAACT GCCTGACCGA AGCCCTGGGC CTGGCCCTGC CGGGCAACGG TTCGACCCTG
GCCACCCACT CCGACCGCGA GCAGCTGTTC CTCACGGCCG GCCGCACCAT CGTCGAGCTG
TGCAAGCGCT ACTACGGCGA GAATGACGAG TCGGTCCTGC CACGCAGCAT CGCCAACTTC
AAAGCGTTCG AAAACGCCAT GATGCTGGAC ATCGCCATGG GCGGCTCGAC CAACACCATC
CTGCACCTGC TGGCCGCAGC ACAAGAAGGT GAAGTGGCGT TCGACCTGCG CGACATCGAC
CGCCTGTCAC GCAAAGTGCC GCAGCTGTGC AAAGTGGCGC CAAACATCCA GAATTACCAC
ATGGAAGACG TCCACCGCGC CGGCGGCATC TTCAGCATCC TCGGTTCGCT GGCCCGTGGC
GGCCTGCTGC ACACCGACCT GCCGACCGTG CACAGCCGCA GCATGGAAGA AGCCATCGCC
AAATGGGACA TCACCCAGAC CGATGACGAA GCGGTGCACA CCTTCTTCAA GGCCGGCCCG
GCCGGTATCC CGACCCAGAC CGCATTCAGC CAGTCGACCC GTTGGGAAAC CCTCGACGAC
GACCGTGAAA ACGGCTGCAT CCGCAGCTTC GAACACGCCT ACTCGCAAGA GGGCGGCCTG
GCCGTGCTGT ACGGCAACAT CGCACTGGAT GGCTGCGTGG TCAAAACGGC CGGCGTGGAC
GAATCGATCC ACGTGTTCGA GGGCACCGCG AAGATCTTCG AAAGCCAGGA CAGCGCCGTG
CGCGGCATCC TCGCCGACGA GGTGAAAGCC GGCGACATCG TCATCATCCG CTACGAAGGC
CCGAAAGGCG GCCCGGGCAT GCAAGAAATG CTCTACCCGA CCTCGTACCT CAAGTCCAAA
GGCCTGGGCA AGGCCTGCGC CCTGCTCACC GACGGTCGCT TCTCGGGCGG TACCTCGGGC
CTGTCGATCG GCCACGCCTC GCCAGAGGCC GCGGCGGGCG GTGCCATCGG CCTGGTGCGC
GACGGCGACA AGGTACTGAT CGACATCCCT AACCGTTCGA TCAACCTGCT GGTCAGCGAT
GAAGAGCTGG CGGAACGCCG TGTCGAGCAG GACAAGAAGG GCTGGAAGCC AGCCGAGGTC
CGTCCCCGCA AGGTAACCAC CGCGCTCAAG GCCTATGCCC TGCTGGCCAC CAGTGCCGAC
AAAGGCGCTG TGCGTAACAA GGCGATGCTG GAAGGCCTCT GA
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| Protein sequence | MPDYRSKTST QGRNMAGARA LWRATGMKDE DFKKPIIAIA NSFTQFVPGH VHLKDLGQLV
AREIERAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADAVEYMVNA HCADAIVCIS
NCDKITPGML MAALRLNIPV IFVSGGPMEA GKTKLASHGL DLVDAMVIAA DSTASDEKVA
EYERSACPTC GSCSGMFTAN SMNCLTEALG LALPGNGSTL ATHSDREQLF LTAGRTIVEL
CKRYYGENDE SVLPRSIANF KAFENAMMLD IAMGGSTNTI LHLLAAAQEG EVAFDLRDID
RLSRKVPQLC KVAPNIQNYH MEDVHRAGGI FSILGSLARG GLLHTDLPTV HSRSMEEAIA
KWDITQTDDE AVHTFFKAGP AGIPTQTAFS QSTRWETLDD DRENGCIRSF EHAYSQEGGL
AVLYGNIALD GCVVKTAGVD ESIHVFEGTA KIFESQDSAV RGILADEVKA GDIVIIRYEG
PKGGPGMQEM LYPTSYLKSK GLGKACALLT DGRFSGGTSG LSIGHASPEA AAGGAIGLVR
DGDKVLIDIP NRSINLLVSD EELAERRVEQ DKKGWKPAEV RPRKVTTALK AYALLATSAD
KGAVRNKAML EGL
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