Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4987 |
Symbol | |
ID | 5190807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5605782 |
End bp | 5606384 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640589472 |
Product | putative methyltransferase |
Protein accession | YP_001270291 |
Protein GI | 148550189 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGAT CCACCCCTCC CGCCCGCCCG CAAGCGGGCC AAAGCAAGGG CCAGGGCCAC CTGCGCATTA TCGCCGGCGA GTGGCGCAGC CGCCGCCTGG CGGTGCCGGA AGGCGAAGGC CTGCGGCCAA CGCCTGACCG CGTACGGGAA ACCGTATTCA ACTGGCTGGC ACCCTACATC GAGGGCGCCC GCGTGCTGGA CGCCTTCACC GGCAGCGGTG CCTTGGTGCT CGAAGCCCTG TCCCGTGGGG CCGAGGATGC CGTGGCGCTG GACAGCAACC CTGCGGCCAT TGCCAACCTG AAGAACAACC TCGAAATCCT GCGCTGTCCC CGCGGGCAAA TTCTGCAAAC CGACGCCCTG CGCTACCTGC AAGGCCCGGC CAAGCAGCAG TTCGATGTCG TGTTCCTCGA CCCGCCGTTC CACCAGGACC TGCTGGCCAA CACCTGCAAC ATGCTGGAGC AGCATCAGTG GTTGAGCGAG CAGGCATGGG TCTACACAGA AAGCGAAGCG GCACCCTCGA CCTTGCAGCT GCCAGGCAAC TGGCGCCTGC ACCGCGAGAA GAAGACCGGC CAGGTGCACT ACGCACTCTG GCAGCGGGGC TGA
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Protein sequence | MPRSTPPARP QAGQSKGQGH LRIIAGEWRS RRLAVPEGEG LRPTPDRVRE TVFNWLAPYI EGARVLDAFT GSGALVLEAL SRGAEDAVAL DSNPAAIANL KNNLEILRCP RGQILQTDAL RYLQGPAKQQ FDVVFLDPPF HQDLLANTCN MLEQHQWLSE QAWVYTESEA APSTLQLPGN WRLHREKKTG QVHYALWQRG
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