Gene Pput_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4987 
Symbol 
ID5190807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5605782 
End bp5606384 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID640589472 
Productputative methyltransferase 
Protein accessionYP_001270291 
Protein GI148550189 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAT CCACCCCTCC CGCCCGCCCG CAAGCGGGCC AAAGCAAGGG CCAGGGCCAC 
CTGCGCATTA TCGCCGGCGA GTGGCGCAGC CGCCGCCTGG CGGTGCCGGA AGGCGAAGGC
CTGCGGCCAA CGCCTGACCG CGTACGGGAA ACCGTATTCA ACTGGCTGGC ACCCTACATC
GAGGGCGCCC GCGTGCTGGA CGCCTTCACC GGCAGCGGTG CCTTGGTGCT CGAAGCCCTG
TCCCGTGGGG CCGAGGATGC CGTGGCGCTG GACAGCAACC CTGCGGCCAT TGCCAACCTG
AAGAACAACC TCGAAATCCT GCGCTGTCCC CGCGGGCAAA TTCTGCAAAC CGACGCCCTG
CGCTACCTGC AAGGCCCGGC CAAGCAGCAG TTCGATGTCG TGTTCCTCGA CCCGCCGTTC
CACCAGGACC TGCTGGCCAA CACCTGCAAC ATGCTGGAGC AGCATCAGTG GTTGAGCGAG
CAGGCATGGG TCTACACAGA AAGCGAAGCG GCACCCTCGA CCTTGCAGCT GCCAGGCAAC
TGGCGCCTGC ACCGCGAGAA GAAGACCGGC CAGGTGCACT ACGCACTCTG GCAGCGGGGC
TGA
 
Protein sequence
MPRSTPPARP QAGQSKGQGH LRIIAGEWRS RRLAVPEGEG LRPTPDRVRE TVFNWLAPYI 
EGARVLDAFT GSGALVLEAL SRGAEDAVAL DSNPAAIANL KNNLEILRCP RGQILQTDAL
RYLQGPAKQQ FDVVFLDPPF HQDLLANTCN MLEQHQWLSE QAWVYTESEA APSTLQLPGN
WRLHREKKTG QVHYALWQRG