Gene Pput_4984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4984 
Symbol 
ID5191286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5601219 
End bp5602712 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content66% 
IMG OID640589469 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_001270288 
Protein GI148550186 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTT CCAACGACGA CAAAAAAGCG CCGGCCGAGG CTGGTGAGAA GAAAGGCCTG 
TTCAGCTGGT TTCGCAAGAA GCCGCAGCCA CCTGCGGGAG CGGGCGTGCC CGCGCATGAA
CCCCCCGCTG TCGAGCAGTC TGCAGCCGCT CCGGTCGAGG GGGCTGCCGC CGAAGCGCCA
CAGGCCCTCG AACCCGTTCA GGCCCCTGCT GCCCCACAGC TGGCTGAGCC GCAGCCGGAC
GCCGCACCGG CCCGGCCCCC GGTAGTCGAG GCCCCCGTCC CTGAACCGGT GGCGTCCCAG
CCATTGCAGG CGCCTGAGCC AGAGCCGGTC GCATCCCAGC CGCTGGTGGC ACCTGCACCG
CAGCCGGTTG CGTCCATGCC CTTGCAGGCG GCCCCTGTCG AGTCTGCCCC TGTCGAGACC
GCAGCGCCGG TCAGCAACCT GGTGCTGCCG GTTGCCGAAG AGCCCGTGGC CCTGGTGCCG
GACCTGGAGC CGAAGGCACC GCCCGCAATC CCGGAACGCG CGGTACCCGC CCCGGCGGCG
CCTGTTGCTG CACCCGTCGA ACAGGCCAAG CCCGGCTTCT TCGCGCGCCT CAAGCAAGGC
CTGTCCAAGA CCAGTGCCAG CATCGGCGAG GGCATGGCCA GCCTGTTCCT CGGCAAGAAG
GTCATCGACG ACGACCTGCT CGATGAAATC GAGACGCGCC TGCTGACTGC CGACGTGGGT
GTGGAGGCTA CCTCGGCCAT TGTCCAGAAC CTGACCCAGA AGGTCGCGCG CAAGCAGTTG
GCCGATGCCG ATGCCCTGTA CAAATCGTTG CAGGAAGAAC TGGCTGCGCT GCTGCGCCCG
GTCGAGCAGC CGCTGAAGGT ACAGGCCCAG AACAAACCCT ATGTGATCCT TGTGGTTGGC
GTGAACGGCG CTGGCAAGAC CACCACCATT GGCAAACTGG CGAAAAAGCT GCAACTGGAA
GGCAAGAAGG TCATGCTGGC TGCCGGTGAT ACCTTCCGCG CCGCCGCGGT CGAGCAGTTG
CAGGTGTGGG GCGAGCGTAA CCAGATTCCG GTGATCGCCC AGCACACGGG TGCCGACTCT
GCTTCGGTCA TCTTCGATGC CGTGCAGGCC GCCAAGGCCC GTGGCGTCGA CGTGCTGATC
GCCGACACTG CCGGCCGCCT GCACACCAAA GACAACCTGA TGGAAGAGCT GAAGAAGGTC
CGCCGGGTCA TCGGCAAGCT CGACGTTGAG GCGCCGCACG AGGTGCTGCT GGTGCTTGAC
GCCGGCACCG GCCAGAACGC CATCAGTCAG GCCAAGTACT TCAACCAGAG CGTCGAGCTG
ACCGGCCTGG CCCTGACCAA GCTGGACGGC ACTGCCAAGG GCGGGGTGAT CTTCGCCCTG
GCCAAGCAGT TCAACATCCC GATCCGTTTC ATCGGCGTCG GTGAAGGCAT CGACGACCTG
CGTACCTTCG AAGCCGAGCC GTTCGTCAAG GCTCTGTTCG CCGAGCGAGA TTGA
 
Protein sequence
MFGSNDDKKA PAEAGEKKGL FSWFRKKPQP PAGAGVPAHE PPAVEQSAAA PVEGAAAEAP 
QALEPVQAPA APQLAEPQPD AAPARPPVVE APVPEPVASQ PLQAPEPEPV ASQPLVAPAP
QPVASMPLQA APVESAPVET AAPVSNLVLP VAEEPVALVP DLEPKAPPAI PERAVPAPAA
PVAAPVEQAK PGFFARLKQG LSKTSASIGE GMASLFLGKK VIDDDLLDEI ETRLLTADVG
VEATSAIVQN LTQKVARKQL ADADALYKSL QEELAALLRP VEQPLKVQAQ NKPYVILVVG
VNGAGKTTTI GKLAKKLQLE GKKVMLAAGD TFRAAAVEQL QVWGERNQIP VIAQHTGADS
ASVIFDAVQA AKARGVDVLI ADTAGRLHTK DNLMEELKKV RRVIGKLDVE APHEVLLVLD
AGTGQNAISQ AKYFNQSVEL TGLALTKLDG TAKGGVIFAL AKQFNIPIRF IGVGEGIDDL
RTFEAEPFVK ALFAERD