Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4984 |
Symbol | |
ID | 5191286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5601219 |
End bp | 5602712 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640589469 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_001270288 |
Protein GI | 148550186 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGGTT CCAACGACGA CAAAAAAGCG CCGGCCGAGG CTGGTGAGAA GAAAGGCCTG TTCAGCTGGT TTCGCAAGAA GCCGCAGCCA CCTGCGGGAG CGGGCGTGCC CGCGCATGAA CCCCCCGCTG TCGAGCAGTC TGCAGCCGCT CCGGTCGAGG GGGCTGCCGC CGAAGCGCCA CAGGCCCTCG AACCCGTTCA GGCCCCTGCT GCCCCACAGC TGGCTGAGCC GCAGCCGGAC GCCGCACCGG CCCGGCCCCC GGTAGTCGAG GCCCCCGTCC CTGAACCGGT GGCGTCCCAG CCATTGCAGG CGCCTGAGCC AGAGCCGGTC GCATCCCAGC CGCTGGTGGC ACCTGCACCG CAGCCGGTTG CGTCCATGCC CTTGCAGGCG GCCCCTGTCG AGTCTGCCCC TGTCGAGACC GCAGCGCCGG TCAGCAACCT GGTGCTGCCG GTTGCCGAAG AGCCCGTGGC CCTGGTGCCG GACCTGGAGC CGAAGGCACC GCCCGCAATC CCGGAACGCG CGGTACCCGC CCCGGCGGCG CCTGTTGCTG CACCCGTCGA ACAGGCCAAG CCCGGCTTCT TCGCGCGCCT CAAGCAAGGC CTGTCCAAGA CCAGTGCCAG CATCGGCGAG GGCATGGCCA GCCTGTTCCT CGGCAAGAAG GTCATCGACG ACGACCTGCT CGATGAAATC GAGACGCGCC TGCTGACTGC CGACGTGGGT GTGGAGGCTA CCTCGGCCAT TGTCCAGAAC CTGACCCAGA AGGTCGCGCG CAAGCAGTTG GCCGATGCCG ATGCCCTGTA CAAATCGTTG CAGGAAGAAC TGGCTGCGCT GCTGCGCCCG GTCGAGCAGC CGCTGAAGGT ACAGGCCCAG AACAAACCCT ATGTGATCCT TGTGGTTGGC GTGAACGGCG CTGGCAAGAC CACCACCATT GGCAAACTGG CGAAAAAGCT GCAACTGGAA GGCAAGAAGG TCATGCTGGC TGCCGGTGAT ACCTTCCGCG CCGCCGCGGT CGAGCAGTTG CAGGTGTGGG GCGAGCGTAA CCAGATTCCG GTGATCGCCC AGCACACGGG TGCCGACTCT GCTTCGGTCA TCTTCGATGC CGTGCAGGCC GCCAAGGCCC GTGGCGTCGA CGTGCTGATC GCCGACACTG CCGGCCGCCT GCACACCAAA GACAACCTGA TGGAAGAGCT GAAGAAGGTC CGCCGGGTCA TCGGCAAGCT CGACGTTGAG GCGCCGCACG AGGTGCTGCT GGTGCTTGAC GCCGGCACCG GCCAGAACGC CATCAGTCAG GCCAAGTACT TCAACCAGAG CGTCGAGCTG ACCGGCCTGG CCCTGACCAA GCTGGACGGC ACTGCCAAGG GCGGGGTGAT CTTCGCCCTG GCCAAGCAGT TCAACATCCC GATCCGTTTC ATCGGCGTCG GTGAAGGCAT CGACGACCTG CGTACCTTCG AAGCCGAGCC GTTCGTCAAG GCTCTGTTCG CCGAGCGAGA TTGA
|
Protein sequence | MFGSNDDKKA PAEAGEKKGL FSWFRKKPQP PAGAGVPAHE PPAVEQSAAA PVEGAAAEAP QALEPVQAPA APQLAEPQPD AAPARPPVVE APVPEPVASQ PLQAPEPEPV ASQPLVAPAP QPVASMPLQA APVESAPVET AAPVSNLVLP VAEEPVALVP DLEPKAPPAI PERAVPAPAA PVAAPVEQAK PGFFARLKQG LSKTSASIGE GMASLFLGKK VIDDDLLDEI ETRLLTADVG VEATSAIVQN LTQKVARKQL ADADALYKSL QEELAALLRP VEQPLKVQAQ NKPYVILVVG VNGAGKTTTI GKLAKKLQLE GKKVMLAAGD TFRAAAVEQL QVWGERNQIP VIAQHTGADS ASVIFDAVQA AKARGVDVLI ADTAGRLHTK DNLMEELKKV RRVIGKLDVE APHEVLLVLD AGTGQNAISQ AKYFNQSVEL TGLALTKLDG TAKGGVIFAL AKQFNIPIRF IGVGEGIDDL RTFEAEPFVK ALFAERD
|
| |