Gene Pput_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4980 
SymbolmtgA 
ID5194133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5597596 
End bp5598306 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID640589465 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_001270284 
Protein GI148550182 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAA CGCTTATCCG TCGCCTCTCC CGCGCCCTGC TCTGGTTCGT TGCCGGCAGC 
ATCGTGCTGG TGCTGGTGTT CCGCTGGGTA CCACCGCCCG GCACGGCGCT GATGGTCGAG
CGCAAGGTAC AGTCTTGGGT GAATGGTGAA CCGATCGACC TGCAGCGCGA CTGGGAGCCA
TGGGAGAACA TCTCCGATGA GCTCAAGGTT GCAGTCATTG CTGGCGAGGA CCAGAAGTTC
GCCAACCACT GGGGCTTCGA CCTCCCGGCC ATTCAGGCGG CGCTGGCCCA CAACGAGCGC
GGTGGCAACA TTCGCGGCGC CAGCACCCTG ACCCAACAAG TGGCCAAGAA CCTGTTTCTG
TGGTCAGGCC GCAGCTGGTT TCGCAAGGGG CTGGAGGCCT GGTTCACCGC ACTGATTGAG
CTGTTCTGGT CGAAGGAGCG GATTCTCGAG GTCTATTTGA ACAGCGCCGA GTGGGGCAAG
GGCGTGTTTG GTGCCCAGGC GGCGGCGCGT TATCACTTTG GTGTCGACGC CAGCCGGCTC
AGCCGCCAGC AGGCGGCGCA GCTGGCTGCG GTGCTGCCTA GCCCAATCAA ATGGAGTGCC
AGCCGGCCGA GTGCCTACGT GGCCAGCCGG GCCGGCTGGA TTCGCCGGCA GATGAGCCAG
TTGGGTGGGC CCAGCTACCT GATGCAGCTG GACTCCTCCA GAAAGCTTTG A
 
Protein sequence
MLSTLIRRLS RALLWFVAGS IVLVLVFRWV PPPGTALMVE RKVQSWVNGE PIDLQRDWEP 
WENISDELKV AVIAGEDQKF ANHWGFDLPA IQAALAHNER GGNIRGASTL TQQVAKNLFL
WSGRSWFRKG LEAWFTALIE LFWSKERILE VYLNSAEWGK GVFGAQAAAR YHFGVDASRL
SRQQAAQLAA VLPSPIKWSA SRPSAYVASR AGWIRRQMSQ LGGPSYLMQL DSSRKL