| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4968 |
|---|
| Symbol | |
|---|
| ID | 5192700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5589205 |
|---|
| End bp | 5590023 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640589453 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_001270272 |
|---|
| Protein GI | 148550170 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CACGTATTGC CTTTATCGGC GCCGGCAACA TGGCCGCCAG CCTGATCGGT
GGTCTGCGTG CCCAGGGCCT GGACGCCTCG CAGATCCGCG CCAGCGACCC GGGCGCCGAG
ACCCGCAGTC GCATCCAGGC CGAGCACGGC ATTGAAGCCT TCGAGGACAA CGCCCAGGCC
ATCGATGGCG CTGACGTCAT CGTGCTGGCG GTCAAGCCAC AAGTCATGAA AACCGTATGT
CAGGCACTGC AACCCAACCT GCAGGATGGC CAGCTGATCG TTTCAATCGC CGCCGGCATC
ACGTGCGCCA GCCTGCAAAG CTGGGTGGGC GCTCGCCCGG TGGTGCGCTG CATGCCCAAC
ACCCCGGCAT TGCTGCGCCA AGGCGTGAGC GGCCTGTACG CCACCGCTGA AGTGTCCGGC
GAACAGCGTC AGCAGGCCGA ACAACTGCTG TCGGCCGTGG GCACCGCCCT GTGGCTGGAG
CAGGAACAGC AACTGGACGC CGTGACAGCT GTGTCCGGCA GTGGCCCGGC ATACTTCTTC
CTGCTGATCG AGGCCATGAC CGCGGCAGGC GAAAAACTCG GCCTGCCACG CGAAACGGCC
TCCCAACTGA CCTTGCAGAC GGCCCTGGGC GCCGCGCGCA TGGCAGTTGC AAGCGATGTC
GATGCCGCTG AACTGCGCCG CCGCGTCACT TCGCCCGCCG GCACCACGGA AGCGGCGATC
AAGTCGTTCC AGGCCAGCGG CTTCGAAGCC ATCGTCGAGC AGGCGCTGCA GGCTGCAGCC
ACGCGCTCCG CCGAGCTGGC CGAACAACTG GGCAAATAA
|
|---|
| Protein sequence | MSKTRIAFIG AGNMAASLIG GLRAQGLDAS QIRASDPGAE TRSRIQAEHG IEAFEDNAQA
IDGADVIVLA VKPQVMKTVC QALQPNLQDG QLIVSIAAGI TCASLQSWVG ARPVVRCMPN
TPALLRQGVS GLYATAEVSG EQRQQAEQLL SAVGTALWLE QEQQLDAVTA VSGSGPAYFF
LLIEAMTAAG EKLGLPRETA SQLTLQTALG AARMAVASDV DAAELRRRVT SPAGTTEAAI
KSFQASGFEA IVEQALQAAA TRSAELAEQL GK
|
|---|
| |