Gene Pput_4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4962 
SymbolargS 
ID5190244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5583547 
End bp5585283 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content63% 
IMG OID640589447 
Productarginyl-tRNA synthetase 
Protein accessionYP_001270266 
Protein GI148550164 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA CCATTCGCCA GCTGATCCAG CAAGCCCTCA CCCAACTCGT CACCGACGGT 
GTGCTGCCTG AAGGGCTGTC GCCGGCGATC CAGGTGGAAA ACGCCCGGGA CAAGACCCAC
GGCGACTTCG CCAGCAACAT CGCCATGATG CTGGCCAAGC CGGCCGGCAT GAAGCCGCGC
GACCTCGCCG AAAAACTGAT CAACGCCCTG CCGGCCAGCG CCGACATCAG CAAGGTCGAG
ATTGCAGGCC CCGGCTTCCT CAACTTCTTC CAGAACACCG ACGCCCTGGC CAACCGCCTG
GATGCCGCCC TGGCCGACGC CCACCTGGGT GCACGCAAAG CCGGCCCGGC GCAAAAGGTG
GTGATCGACA TGTCGGCGCC CAACCTGGCC AAGGAAATGC ACGTCGGCCA CCTGCGCTCG
ACCATCATCG GCGACAGCGT TGCGCGCGTG CTGGAGTTCC TGGGCGACAA CGTCATCCGC
CAGAACCACG TCGGCGACTG GGGTACCCAG TTCGGCATGC TGATGGCCTA CCTGCAGGAA
AACCCGATCA CCAGCGACGA GCTGTCGGAC CTGGAAAACT TCTACCGCGC GGCGAAGAAA
CGCTTCGATG AATCGGAGGA GTTCGCCACT CGCGCCCGCG GCCTGGTGGT CAAGCTGCAA
GCCGGTGACC CCGAGTGCCT GGCCCTTTGG ACACGCTTCA AGGACATCTC GCTGTCGCAC
TGCCAGAAGA CCTACGAGCT GCTCAACGTC AAACTGACCA TGGCCGACGT GATGGGCGAA
AGCGCCTACA ACGACGACTT GGCCAACGTG GTGGCCGACC TCAAGGCCAA GGGCCTGCTG
GTCGAAGACC AGGGCGCCCA ATGCGTGTTC CTCGACGAGT TCAAGAACAG CGAAGGCGAC
CCGCTGCCGG TGATCGTGCA GAAGGCTGAC GGCGGCTATC TGTACGCCAC CACCGACCTG
GCTGCCGTGC GTTACCGCAG CAATGTGTTG AAGGCTGACC GCGCACTGTA CTTCGTCGAC
CAGCGCCAGG CCCTGCACTT CAATCAGGTG TTCGAAGTGG CCCGCCGCGC TGGCTTCGTC
GGCCACCCGA TGCAAATGGA GCACATGGGC TTCGGCACCA TGAACGGCGC CGACGGCCGC
CCGTTCAAGA CCCGTGACGG CGGCACCGTG AAGCTGATCG ACCTGCTCAC CGAGGCCAAG
GAGCGCGCCT ACGCGCTGGT CAAGGAAAAG AACCCGAGCC TGGCCGACGA CGAACTGCGC
CACATCGGCG AGGTGGTGGG CATTGGCGCG GTGAAATACG CCGACCTGTC CAAGCACCGC
ACCAGTGACT ACAGCTTCAA CTTCGAGTTG ATGCTCAACT TCGAAGGCAA CACCGCCCCT
TACCTGCTGT ACGCTTACAC CCGCGTAGCC GGCGTGTTCC GCAAGCTGGG CAAAGGCTTT
GACGAAGTCG ACGGCAAAAT CGTGCTGCAC GCAGCCCACG AGCAGGACTT GGCCGCGCGC
CTGGCGCAGT TTGGCGAAAT CCTCAACAAC GTCGCCGAAA AAGGCACGCC GCACGTATTG
TGCAGCTACC TGTACGACTT GGCCGGCCTG TTCTCGAGCT TCTACGAGAA CTGCCCGATC
CTCGCTGCCG AAACCCCTTC GCAGCAGCAG AGCCGGCTGC GCCTGGCCGC CCTGACCGGC
CGCACCCTCA AACAAGGTCT GGAACTGCTC GGCCTGGAAA CCCTGGAGCG CATGTAA
 
Protein sequence
MKDTIRQLIQ QALTQLVTDG VLPEGLSPAI QVENARDKTH GDFASNIAMM LAKPAGMKPR 
DLAEKLINAL PASADISKVE IAGPGFLNFF QNTDALANRL DAALADAHLG ARKAGPAQKV
VIDMSAPNLA KEMHVGHLRS TIIGDSVARV LEFLGDNVIR QNHVGDWGTQ FGMLMAYLQE
NPITSDELSD LENFYRAAKK RFDESEEFAT RARGLVVKLQ AGDPECLALW TRFKDISLSH
CQKTYELLNV KLTMADVMGE SAYNDDLANV VADLKAKGLL VEDQGAQCVF LDEFKNSEGD
PLPVIVQKAD GGYLYATTDL AAVRYRSNVL KADRALYFVD QRQALHFNQV FEVARRAGFV
GHPMQMEHMG FGTMNGADGR PFKTRDGGTV KLIDLLTEAK ERAYALVKEK NPSLADDELR
HIGEVVGIGA VKYADLSKHR TSDYSFNFEL MLNFEGNTAP YLLYAYTRVA GVFRKLGKGF
DEVDGKIVLH AAHEQDLAAR LAQFGEILNN VAEKGTPHVL CSYLYDLAGL FSSFYENCPI
LAAETPSQQQ SRLRLAALTG RTLKQGLELL GLETLERM