| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4956 |
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| Symbol | |
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| ID | 5194436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5574767 |
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| End bp | 5575648 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589441 |
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| Product | Tfp pilus assembly protein ATPase PilM-like protein |
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| Protein accession | YP_001270260 |
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| Protein GI | 148550158 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGAC GCTTCGGCAA GGATGCCGGT TCACTGGTGG GGGTGGAAAT CACGCCCGAC
GCCGTTCGGA TAATGCAACT GCAGCAGCGC AATCGACTCT GGCGTGTGAT GGGATCGGCA
CAAGAGCTGT TTCAGGCGCC GCTGGCCGAT GACTGGGCTG AGGCGCCTGG GGAGGTGGTG
GCTGCGCTGC AGCGCGCTTG CCGGCGCAGC GGCCTCAGGC AACGCCGGGT AGCGCTGGCA
CTGCCGGCCA GTCAGGTTAT CTGCAAGTTG TGCCATCTGC CGGTGGAGCA GAGCGGGGCG
CAGTTGGAGG CACAACTGCT TGCCGATGCA GAGCGGCTGT TTCCGTTTCC GCTGGAAGAC
CTGGCCTTGG ATTTTCAGGT CATGGGGGCT TCCCATGACC AGCCAGGTTG CTCAGAGGTA
ATGGTTGCTG CCTGTCGACA GAGTGCGCTG GCGTCACTCG AATCCGTCGT CGAGGAGGCG
GGCTTGCAGT TGGAAGCCGT CGAGGTCGAC ACCATTGCCT TGTGCCGCAT GTTGCCACAG
GGTGGCCTTG AGGGAGCAGC GCTGCTGCGT GTCGAAACCC GCAGCGTAAC GCTTCATGAC
TGGCAGCCGG GCAGGGTGTA CCAGCGCTGT GAACTGCAAA CGACTGGCCC GGATATGAAC
GGGCAATGGC CAGAGCGCCT GCAGGCTTTA CTTGCCAGGC AGAGCCTTCC TGCGGGGTTG
TGGGTTGCCA GCAGCTCATC GATCAATCCG GGCTGGCTGC AGGGCCTTGG CAGCCGGCTG
AATGTGCGGT GCACGTACCT GCCTGGGCTG GCAGGGCTTG AGCATGTTGA TGGGGCGATG
CTCCTGGCCT GCGCCTTGGC CTTGGGAGGT TTGCGGCCAT GA
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| Protein sequence | MFGRFGKDAG SLVGVEITPD AVRIMQLQQR NRLWRVMGSA QELFQAPLAD DWAEAPGEVV
AALQRACRRS GLRQRRVALA LPASQVICKL CHLPVEQSGA QLEAQLLADA ERLFPFPLED
LALDFQVMGA SHDQPGCSEV MVAACRQSAL ASLESVVEEA GLQLEAVEVD TIALCRMLPQ
GGLEGAALLR VETRSVTLHD WQPGRVYQRC ELQTTGPDMN GQWPERLQAL LARQSLPAGL
WVASSSSINP GWLQGLGSRL NVRCTYLPGL AGLEHVDGAM LLACALALGG LRP
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