| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4948 |
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| Symbol | gltD |
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| ID | 5190873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5562340 |
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| End bp | 5563758 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589433 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001270252 |
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| Protein GI | 148550150 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.551106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC GTCTGAACAA CGACTTCCAG TTCATCGAAG TGGGCCGAAA GGACCCGAAA
AAAAAGCTGT TGCGCCAGCG CAAGAAGGAG TTCGTGGAAA TCTACGAACC GTTCAAGCCG
CAGCAGTCCG TGGAGCAGGC GCACCGCTGC CTGGGCTGCG GTAACCCGTA TTGCGAGTGG
AAGTGCCCGG TACACAACTT CATCCCCAAC TGGTTGAAGC TGGTCTCCGA AGGCAACATC
CTGGCCGCGG CGGAACTGTC GCACCAGACC AACACCCTGC CGGAAGTATG CGGCCGTGTT
TGCCCGCAAG ACCGCCTGTG CGAGGGTGCC TGCACCCTGA ACGACGGTTT CGGCGCGGTG
ACCATCGGCT CGGTGGAGAA GTACATCACC GACACCGCCT TCGCCATGGG CTGGCGCCCG
GACATGTCCA AGGTCAAGCC CACCGGCAAG CGCGTCGCCA TCATCGGCGC AGGCCCGGCT
GGCCTGGGCT GCGCCGATGT GCTGGTGCGC GCCGGGGTAA CCCCGGTGGT GTTCGACAAA
AACCCTGAGA TCGGTGGCCT GCTGACTTTC GGTATCCCCG AGTTCAAGCT GGAAAAGACC
GTGCTCAGCA ACCGCCGTGA AGTGTTCACC GGCATGGGCA TCGAGTTCCG CCTGAACACC
GAGGTGGGCA AGGACGTGAC CATGGAACAG TTGCTCGCCG AGTACGACGC GGTGTTCATG
GGCATGGGTA CCTACACCTA CATGAAGGGC GGCTTCCCGG GTGAAGACCT GCCGGGCGTG
CATGACGCAC TGGACTTCCT GATCGCCAAC GTCAACCGCA ACCTGGGTTT CGAGAAGTCG
CCGGAAGACT TCGTCGACAT GCAGGGCAAG AAAGTGGTGG TGCTGGGCGG TGGTGACACC
GCGATGGACT GCAACCGTAC CTCGATCCGT CAGGGTGCCA AGGCGGTGAC CTGTGCTTAT
CGTCGTGACG AAGCCAACAT GCCGGGTTCG CGCAAAGAGG TGAAGAACGC CAAGGAAGAG
GGTGTGAAGT TCCTCTACAA CCGCCAGCCC ATCGCCATCG TGGGTGAGGA CAAGGTCGAA
GGCGTCAAAG TGGTCGAGAC CCGCCTGGGC GAGCCTGATG CCCGTGGCCG CCGCAGCCCT
GAGCCAATCC CGGGCTCCGA AGAGATCCTG CCGGCAGACG CCGTGGTAAT CGCCTTCGGC
TTCCGCCCGA GCCCGGCGCC GTGGTTTGAG CAGCATGGCA TTCAGCTGGA CAGCCAGGGC
CGTGTGGTTG CCCCGGAGAA GGGCAAGTTC AAGCACCAGA CCAGCAACCC GAAAGTGTTT
GCCGGTGGCG ACATGGTGCG CGGTTCGGAC CTGGTGGTGA CTGCAATCTT CGAAGGGCGT
ACGGCCGCCG AGGGTATCCT GGACTACCTC GAAGTCTGA
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| Protein sequence | MAERLNNDFQ FIEVGRKDPK KKLLRQRKKE FVEIYEPFKP QQSVEQAHRC LGCGNPYCEW
KCPVHNFIPN WLKLVSEGNI LAAAELSHQT NTLPEVCGRV CPQDRLCEGA CTLNDGFGAV
TIGSVEKYIT DTAFAMGWRP DMSKVKPTGK RVAIIGAGPA GLGCADVLVR AGVTPVVFDK
NPEIGGLLTF GIPEFKLEKT VLSNRREVFT GMGIEFRLNT EVGKDVTMEQ LLAEYDAVFM
GMGTYTYMKG GFPGEDLPGV HDALDFLIAN VNRNLGFEKS PEDFVDMQGK KVVVLGGGDT
AMDCNRTSIR QGAKAVTCAY RRDEANMPGS RKEVKNAKEE GVKFLYNRQP IAIVGEDKVE
GVKVVETRLG EPDARGRRSP EPIPGSEEIL PADAVVIAFG FRPSPAPWFE QHGIQLDSQG
RVVAPEKGKF KHQTSNPKVF AGGDMVRGSD LVVTAIFEGR TAAEGILDYL EV
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