| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4940 |
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| Symbol | |
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| ID | 5193746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5551952 |
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| End bp | 5555260 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589425 |
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| Product | potassium efflux protein KefA |
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| Protein accession | YP_001270244 |
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| Protein GI | 148550142 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.310149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC GCGTGTACCT TCGCACAGCC CTGCTCGGGT TGTGCCTGTC CCTTTCTTTT
GCGGCTAGCG CGGCAGAAGC CCCGACCACC GCCAGTGTCC AGAACAGCCT CGACAAGATC
GCCGAGCGCA AGCTGCCCGA GGCAGACCAG AAGGCGCTGC AGCAGGTGCT TGAACAAACG
TTGAGCCTGC TTGCTGCCAA GGAAGACAAC GAAAAGAAAC TGGCTGCACT CAAGCAGCAG
CTGAGCAGCG CCCCCAAGGA GACCAGCGAC AGCCAGAAGG AGTTGGCCAG GCTCAAGGAA
ACCAAGGCAC AACCGGTGGC ACAGCGCTAC GCCAACCTCA CCGTGCCACA GCTTGAACAG
ATGCTCAGCG AACGCAACAC GCTGCAGGGC GAGCTGCAAA AGGCGTTGTC TGAAGCCAAT
AGCCTGATCA TCAACTCGCA AACCCGCCCC GAGCGCGCCC AGGCCGAGAT CAGCAGCAGC
CAGACCCGCA CCCAGCAGAT CAACAACATC CTCAAAACCG GCAAGGACGG TGGCAAAGCC
ATCAATGCCG ACCAGCGCAA CCAGCTCAAC GCCGAGTTGG CCTCGCTCAA CGCGCTGACC
CTGCTGCGCC GCCAGGAACT GGCCGGCAAC AGCCTGCTGC AAGACCTCGG CAATGCGCGT
CACGACCTGC TGGTCGAGCG CGCTGCGCGC CTGGAGCAGG AAATCCAGGA CCTGCAGACG
CTGATCAACG CCAAACGCCT GGCCCAGTCC CAGGAAGCCG TCACCCAGCA GTCGATTGAG
GCTCAGAAGG CCGGCGGCAG CAGCCTGCTG GCCACTGAAA GCGCGATCAA CCTCAAGCTT
TCCGACTACC TGCTCAAGAG CACCGACCGC CTTAACGAAC TGACCCAGCA GAACCTGCGC
ACCAAACAGC AACTCGACAG CCTGACCCAG GCCGACCAGG CGCTTGACGA GCAGATCAAC
GTGCTCAAGG GAAGCCTGCT GCTGTCGAAG ATTCTCTACA AGCAGAAACA GACCCTGCCG
CACCTGAAGG TCGACCGCGA CCTGGCCGAC CAGATCGCCG ACACCCGCCT GTACCAGTTC
GAAGTCAACC AGCAGCGCGA GCAGATGAGC AGCCCGGTCA CCTACGTCGA CAAGCTGCTG
GCGGCGCAAC CGCAGGAAGA TGTGACCCCG CAGCTGCGCA AGGCCCTGCT GGAAGTGGCC
ATCACCCGCA GCGACCTGTT GGAGCGGCTG AACCGCGAGC TGTCGGCGCT GCTCAACGAA
TCGATCACCC TGCAGCTCAA CCAGAAGCAG CTGCTGGGCA CCGCGCAGAG CCTGCGCACC
ACCCTCGACG AGCAAATGTT CTGGATCCCC AGCAACAAGC CGCTGGACTG GGACTGGCTG
CAATACGTGC CGGAGCGCCT GGCCGACCAG GTCGCCAACC TGCCGTGGGG CTCCAGCCTG
AAAGAGTTGG CCGATGGCCT GAGCCAGCGC CCGTTGCTGT TCCTGCCGCT GCTGTTGGTG
ATCGGCGCGC TGTTGTGGCG GCGCAAATAC CTTTACCAAC GATTAGGCAA AGTGCACCAG
GATATCGGCC ACTTCCGCCG TGACAGCCAA TGGCACACGC CCCAGGCAAT CCTAATCAAC
ATTCTGCTGG CGATGCCGGT CAGCCTTGGT CTGGCGCTGT GCAGCTACGC CCTGCAGATC
GACGCCCGCG GGCAGAATGC CAACCTGGGC GCCGCACTCT GGCAGCTGGC CCAGGCCTGG
CTGGTGTTCT ATACCGCCTA CCGTATCCTC GCACCCGGTG GCGTGGCGGA AGTCCACTTC
CGCTGGCACA AACCGCAGGT CGAGTTCCTG CGCGGCTGGG TTCGCCGCCT GGGCACCGTT
GTGCTGGCAC TGGTCGGCGT GGTGGCGGTG GCCGAGCACC AGCCTTCGGC ATTGGCAGAC
GACGTGTTGG GCATCGGCGT GGTGCTGACC TGCTATGCGC TGATGGCCTG GCTGCTCAGC
CGCCTGCTGC TCAGCAGCCC GGCACACCGT GACACCTCGC TGTTCCGCAG GGCGGTGGGG
GTAGCGTTCA CCGCCCTGCC CATCGCCCTG TTCGTCGCCG TGTGCTTCGG CTACTACTAC
ACGGCACTGA AGCTTACCGA CCGACTCATC TACACCCTGT ACCTGCTGCT GTTCTGGCTG
GTGATCGAGG CCGCCTTCGT GCGCGGCCTG TCGGTGGCTG CACGACGCCT GGCCTACCAG
CGTGCGTTGA CCAAGCGTGC GGCAGCCAAG GAAGGGCTGG ATGGCGAAGT CATCACCGAA
GAGCCAACGC TGGATATCGA ACAGGTCAAC CAGCAGTCGC TGCGCCTGAT CCGCCTGGCC
CTGCTCGGCG GCTTCATCGC CGGCCTGTAC TGGGTGTGGG CCGACCTGAT CTCGGTGTTC
GCCTACCTCA ACAATTTCGT CCTCTACGAA TACACCAGCG GCACCGGCGC CGCCGCCAGC
ATGGTACCGA TCAGCCTCGG CGACCTGCTC GGCGCGCTGG TGATCGTCGG CATCACTTTC
GCCCTGGCCG GCAACTTGCC AGGCTTGCTG GAAGTACTGG TGCTGTCTCG CCTGAACCTG
GCCCAGGGCA GTGCCTACGC CACCACCACG CTGTTGTCGT ACACCATCGT CGGCATCGGC
ATCGTCAGCA CCCTGTCGAC CCTGGGGGTG AGCTGGGACA AGCTGCAATG GCTGGTGGCT
GCGCTGTCAG TAGGGCTGGG CTTCGGCATG CAGGAAATCT TCGCCAACTT CATCTCCGGC
ATCATGATCC TGTTCGAGCG CCCGGTACGG ATTGGCGACA CCATCACCAT CGGCAACCTG
TCGGGCACGG TAAGCAAGAT CCGCATCCGT GCCACCACCA TCACCGACTT CGACCGCAAG
GACATCATCG TCCCCAACAA GACCTTCATC ACTGGCCAAC TGATCAACTG GTCGCTGACC
GATACGGTCA CCCGGGTGAC GCTGAAGCTG GGCATCGACT ATGGCTCAGA CCTCGACCTG
GTGCGCGACC TGCTGCTCAA GGGCGCGCAT GAGAACCCAC GCGTGCTCAA GGATCCGGAA
CCGATCGTGT ACTTCCTCAA CTTCGGCGAG AGCTCGCTGG ACCACGAACT GCGCATGCAC
GTGCGTGACC TGGGCGACCG CAACCCGACG CTGGACGAGA TCAACCGCTA CATCAACCGC
GAGTTCAAGG CCCACAACAT CAAGATCTCG GTACGCCAGG TAGAGGTATT CCTGATGGAC
GCCAAGGGCA GCAAACAGCA ATTGATTCCG ATGGAACAGC CGAAATTGGA TGGCACTGCT
TCGGCCTGA
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| Protein sequence | MSLRVYLRTA LLGLCLSLSF AASAAEAPTT ASVQNSLDKI AERKLPEADQ KALQQVLEQT
LSLLAAKEDN EKKLAALKQQ LSSAPKETSD SQKELARLKE TKAQPVAQRY ANLTVPQLEQ
MLSERNTLQG ELQKALSEAN SLIINSQTRP ERAQAEISSS QTRTQQINNI LKTGKDGGKA
INADQRNQLN AELASLNALT LLRRQELAGN SLLQDLGNAR HDLLVERAAR LEQEIQDLQT
LINAKRLAQS QEAVTQQSIE AQKAGGSSLL ATESAINLKL SDYLLKSTDR LNELTQQNLR
TKQQLDSLTQ ADQALDEQIN VLKGSLLLSK ILYKQKQTLP HLKVDRDLAD QIADTRLYQF
EVNQQREQMS SPVTYVDKLL AAQPQEDVTP QLRKALLEVA ITRSDLLERL NRELSALLNE
SITLQLNQKQ LLGTAQSLRT TLDEQMFWIP SNKPLDWDWL QYVPERLADQ VANLPWGSSL
KELADGLSQR PLLFLPLLLV IGALLWRRKY LYQRLGKVHQ DIGHFRRDSQ WHTPQAILIN
ILLAMPVSLG LALCSYALQI DARGQNANLG AALWQLAQAW LVFYTAYRIL APGGVAEVHF
RWHKPQVEFL RGWVRRLGTV VLALVGVVAV AEHQPSALAD DVLGIGVVLT CYALMAWLLS
RLLLSSPAHR DTSLFRRAVG VAFTALPIAL FVAVCFGYYY TALKLTDRLI YTLYLLLFWL
VIEAAFVRGL SVAARRLAYQ RALTKRAAAK EGLDGEVITE EPTLDIEQVN QQSLRLIRLA
LLGGFIAGLY WVWADLISVF AYLNNFVLYE YTSGTGAAAS MVPISLGDLL GALVIVGITF
ALAGNLPGLL EVLVLSRLNL AQGSAYATTT LLSYTIVGIG IVSTLSTLGV SWDKLQWLVA
ALSVGLGFGM QEIFANFISG IMILFERPVR IGDTITIGNL SGTVSKIRIR ATTITDFDRK
DIIVPNKTFI TGQLINWSLT DTVTRVTLKL GIDYGSDLDL VRDLLLKGAH ENPRVLKDPE
PIVYFLNFGE SSLDHELRMH VRDLGDRNPT LDEINRYINR EFKAHNIKIS VRQVEVFLMD
AKGSKQQLIP MEQPKLDGTA SA
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