Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4931 |
Symbol | |
ID | 5192922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5534446 |
End bp | 5535762 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589416 |
Product | carboxyl-terminal protease |
Protein accession | YP_001270235 |
Protein GI | 148550133 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCACT CGCCTCGTCT CACCCAGCTG GCCCTGTCCA TCGCCCTGGC GGTCGGCGCG CCCCTGGCCA CCGCCGCAGA GCCGGCCAAG GCCGCCGCAG TGCCAGCCAC CGAGGTGACC GCCAAGGCGC CACTGCCGCT GGAAGAACTG CGCACCTTCG CCGAGGTCCT GGACCGCATC AAGGCCGCCT ACGTCGAACC CGTAGACGAC AAGACCCTGC TGGAAAACGC CATCAAGGGC ATGCTCAGCA ACCTTGACCC GCATTCGGCC TACCTTGGCC CCGAGGACTT CCAGGAGCTG CAGGAAAGCA CCAGCGGCGA GTTCGGCGGG CTGGGTATTG AAGTAGGCCA GGAAGACGGC TTCATCAAGG TGGTTTCGCC AATCGACGAC ACCCCAGCCT CGCGGGCCGG CGTGCAGGCT GGTGACTTGA TCGTCAAGAT CAACGGCGCC CCGACCCGCG GCCAGACCAT GACCGAGGCG GTCGACAAGA TGCGCGGCAA GGTCGGCGAG AAAATCACCC TGACCTTGGT ACGCGACGGC GGCAACCCGT TCGACGTGAA CCTGACCCGT GCAGTCATTC AGGTCAAGAG CGTGAAGAGC CAGCTGCTGG AGAACGATTA CGGCTACATC CGTATCACCC AGTTCCAGGT CAAGACCGGT GACGAAGTGG GCAAGGCCCT GGCCAAGCTG CGCAAGGACA ACGGCAAGAA GCTGCGCGGG GTGGTGCTGG ACCTGCGCAA CAACCCAGGC GGCGTGTTGC AGTCGGCAGT GGAAGTGGCC GACCACTTCC TGACCAAAGG TCTGATCGTC TACACCAAGG GCCGCATCGC CAACTCCGAG CTGCGTTTCT CGGCCGACCC GGCCGATGCC AGCGCAGGCG TGCCGCTGGT GGTACTGATC AACGGTGGCA GTGCATCGGC ATCGGAAATT GTCGCCGGCG CCCTGCAGGA CCAGAAGCGC GCCGTGCTGA TGGGCACCGA CAGTTTCGGC AAAGGCTCGG TGCAGACCGT GCTGCCACTG GCCAACGACC GCGCCCTGAA GCTCACCACT GCGCTGTACT ACACCCCCAA CGGCCGCTCG ATCCAGGCTC AGGGCATTGT CCCGGACATC GAGGTGCGCC CGGCCAAGCT CACCGCCGAA GCCGACACTG AAAACTTCAA GGAAGCCGAC CTGCAGGGCC ACCTGGGCAA CGGCAACGGC GGCGCCGACC GCCCGACCGG CAGCAGCAAG CGCAAGGAGC GCCCGCAGGA TGACGACTTC CAGCTGAGCC AGGCACTGAG CCTGCTCAAG GGCCTGAACA TCACCAAGGG CGACTGA
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Protein sequence | MLHSPRLTQL ALSIALAVGA PLATAAEPAK AAAVPATEVT AKAPLPLEEL RTFAEVLDRI KAAYVEPVDD KTLLENAIKG MLSNLDPHSA YLGPEDFQEL QESTSGEFGG LGIEVGQEDG FIKVVSPIDD TPASRAGVQA GDLIVKINGA PTRGQTMTEA VDKMRGKVGE KITLTLVRDG GNPFDVNLTR AVIQVKSVKS QLLENDYGYI RITQFQVKTG DEVGKALAKL RKDNGKKLRG VVLDLRNNPG GVLQSAVEVA DHFLTKGLIV YTKGRIANSE LRFSADPADA SAGVPLVVLI NGGSASASEI VAGALQDQKR AVLMGTDSFG KGSVQTVLPL ANDRALKLTT ALYYTPNGRS IQAQGIVPDI EVRPAKLTAE ADTENFKEAD LQGHLGNGNG GADRPTGSSK RKERPQDDDF QLSQALSLLK GLNITKGD
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