| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4922 |
|---|
| Symbol | |
|---|
| ID | 5192048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5525789 |
|---|
| End bp | 5526874 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640589407 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_001270226 |
|---|
| Protein GI | 148550124 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA GCGATGCACA GCACCGTCTG CTTCTGGACA ATCTGACCAC CGCCACGTTG
CTGCTCAACG CCGAGCTGCG CCTGGAGTAC ATGAACCCGG CCGCAGAAAT GCTGCTGGCC
GTCAGTGGCC AGCGCAGCCA TGGGCAATTC ATCAGCGAGC TGTTCACCGA ATCGACCGAG
GCGCTCAGTT CGCTGCGCCA GGCGGTCGAG CAGGCGCACC CGTTCACCAA GCGTGAAGCG
CAGCTTACAT CGCTGACCGG GCAGACCATC ACCGTCGACT ACGCGGTAAC GCCGATACTG
CATCAAGGCC AGACCCTGCT GTTGCTCGAG GTGCACCCGC GGGACCGTCT GCTGCGCATC
ACCAAGGAAG AGGCCCAACT GAGCAAGCAG GAAACCACCA AGATGCTGGT GCGCGGCCTG
GCCCACGAAA TCAAGAACCC CCTTGGCGGC ATCCGCGGAG CGGCCCAGCT ACTGGCCCGC
GAACTGCCCG AGGAAGGGCT GCGCGACTAC ACCAATGTGA TCATCGAAGA GGCCGACCGC
TTGCGTAACC TGGTCGACCG CATGCTGGGC TCCAACAAGC TGCCGTCGCT GGCCATGACC
AATATTCACG AAGTGCTGGA GCGGGTGTGC AGCCTGGTCG ATGCCGAAAG CCAAGGGTGC
ATCACTTTGG TGCGCGATTA CGACCCAAGC CTGCCGGACG TGCTGATCGA CCGAGAACAG
ATGATTCAGG CCGTACTCAA CATCGTGCGC AACGCCATGC AGGCGATCAG CTCACAGAAT
GAGCTGCGCC TGGGTCGCAT CACCTTGCGC AGCCGTGCCC TGCGCCAGTT CACCATCGGT
CACGTGCGTC ACCGCCTGGT AGCGCGGGTA GAAATCATCG ACAACGGCCC GGGCATCCCG
CCGGAACTGC AGGACACCCT CTTCTATCCC ATGGTCAGTG GCCGCCCGGA CGGTACCGGG
CTGGGCCTGG CCATTACCCA GAACATCATC AGCCAGCACC AGGGCCTGAT CGAGTGTGAA
AGCCACGCTG GCCATACCGC CTTCTCGATT TACCTGCCTC TGGAACAAGG AGCCACCGCC
TCATGA
|
|---|
| Protein sequence | MTISDAQHRL LLDNLTTATL LLNAELRLEY MNPAAEMLLA VSGQRSHGQF ISELFTESTE
ALSSLRQAVE QAHPFTKREA QLTSLTGQTI TVDYAVTPIL HQGQTLLLLE VHPRDRLLRI
TKEEAQLSKQ ETTKMLVRGL AHEIKNPLGG IRGAAQLLAR ELPEEGLRDY TNVIIEEADR
LRNLVDRMLG SNKLPSLAMT NIHEVLERVC SLVDAESQGC ITLVRDYDPS LPDVLIDREQ
MIQAVLNIVR NAMQAISSQN ELRLGRITLR SRALRQFTIG HVRHRLVARV EIIDNGPGIP
PELQDTLFYP MVSGRPDGTG LGLAITQNII SQHQGLIECE SHAGHTAFSI YLPLEQGATA
S
|
|---|
| |