| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4921 |
|---|
| Symbol | |
|---|
| ID | 5190881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5524979 |
|---|
| End bp | 5525521 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640589406 |
|---|
| Product | chorismate mutase, putative |
|---|
| Protein accession | YP_001270225 |
|---|
| Protein GI | 148550123 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGG CCATCACGTC ACTTTGCTTG CCGTTTGCCT TGATCGGCTG TATCGCTCCT
GAAGCCTCCC AGCCTGAATT CAACCCACTC CTATCCAACA TCGAGTACCG ACTGGACCTG
GCCAGCTCGG TTGCACTGCA CAAGTGGGAA CACAACCTTG CCGTAGCAGC GCCCGAGCGC
GAGCGCGAAG TCCTTGCCCT GGTGCGCCAG CAGGCTGCCG ACCATGACCT CAGCCCTGAA
CGCGCCGCAG CTTTCTTCAG CGACCAGATC GAGGCCAACA AGCTGATGCA ATACACCTTG
CTCGATCGCT GGGTCACGCT AGAGCAGAGG CCATCAGCAG CCGTCCTTGA TTTGGTCGAC
CAACTGCGAC CTCGTCTGGA CAAGCTTCAG GCAACGCTTC TGTTCGAGTT GGGGCGCTTC
GACCGGCACC CTCCAAAGGA CTGCGCGCGT AAACTCGCCA ACGCCCTGCA CGCCCGCACC
AATGACCCGA TACGCCACCT TGTCCTGGTC CGGGCGACCG CACAGCTGTG CCCGAAACAC
TAG
|
|---|
| Protein sequence | MRLAITSLCL PFALIGCIAP EASQPEFNPL LSNIEYRLDL ASSVALHKWE HNLAVAAPER
EREVLALVRQ QAADHDLSPE RAAAFFSDQI EANKLMQYTL LDRWVTLEQR PSAAVLDLVD
QLRPRLDKLQ ATLLFELGRF DRHPPKDCAR KLANALHART NDPIRHLVLV RATAQLCPKH
|
|---|
| |