| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4910 |
|---|
| Symbol | |
|---|
| ID | 5193179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 5510406 |
|---|
| End bp | 5511770 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640589395 |
|---|
| Product | N-formimino-L-glutamate deiminase |
|---|
| Protein accession | YP_001270214 |
|---|
| Protein GI | 148550112 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.508756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCT ACTTCGCCGA ACGCGCCCTG CTACCTACGG GCTGGGCCAG CCATGTGCGT
ATCGAGGTCG CCCGCGATGG CCGCGTGGCC AGCATCGAGC CTGGCGCTTC GGCCGAAGGC
GCCGAGCGCC TGGCCGGCCC GCTGCTGCCC GGCATGCCCA ACTTGCACTC GCATGCCTTC
CAGCGCGCCA TGGCAGGCCT GGCGGAAGTT GCCGGCAACC CCAATGACAG TTTCTGGACC
TGGCGAGACC TGATGTACCG CCTGGTCGGG CAGATCAGTC CAGAGCAGCT TCAGGTCATC
GCCCGCCAGC TGTACATCGA GATGCTCAAG GCCGGTTATA CCTCGGTGGC GGAGTTCCAC
TACGTGCACC ACGACCAGGC CGGCAAGCCC TACGCCGACC CGGCCGAGCT GTCGCGACGC
ATCAGCGCGG CCGCAGCCGA CAGCGGCATC GGCCTGACCT TGCTGCCGGT GCTGTACAGC
CATGCAGGCT TTGGCGGCCA GGCGCCGAAC GACGGGCAGC GGCGCTTCAT CAACTCCACC
GGGCAGTACC TGCAGCTGCA AGCCCAGCTC GCCCCGCTGC TGGCCGCGCA ACCGGCGCAG
CAACTGGGCC TGTGCTTCCA CTCGCTGCGG GCGGTAACGC CTGGGCAGAT CGCCGAAGTG
CTGGCGGCCA GCGACAGGCA GTGCCCGGTG CATATCCACA TCGCCGAACA GCAGAAGGAA
GTCGACGACT GCCTGGCCTG GAGCGGCCTG CGCCCGCTGC AGTGGCTGTA CGAGCACGTG
GACGTGGACC GCCGCTGGTG CCTGGTACAC GCTACCCATG CCGAACCGGA CGAAGTCACT
GCCATGGCCC GCAGCGGCGC AGTGGCCGGG TTGTGCCTGA CCACCGAAGC CAACCTGGGC
GATGGGATCT TCCCGGCAGT GGACTTCCTG GCACAGGGCG GACGTATGGG CATTGGTTCG
GACAGCCATG TGTCGTTGAG CGTGGTGGAG GAGCTGCGCT GGCTGGAATA TGGCCAGCGC
CTGCGGGACC AGCGGCGCAA CCGCCTGTAT CGCGGCGACC AACCGATGGT CGGGCGCACG
CTGTATGACG CGGCGTTGGC CGGTGGTGCA CAGGCGCTGG GGCAGGCGGT CGGCGAGTTG
GCGGTGGGCA AGCGTGCCGA CTGGCTGGTG CTCGATGGGC AGGACCCCTA CATCGCCATG
GCGGAGGGTG ATGCCATTCT CAACCGTTGG CTGTTTGCCG GCGGCGATCG CCAGGTGCGC
GATGTGATGG TGAATGGGCA CTGGGTGGTG CGCCAGGGGC GGCATGCGCA AGAAGAAGAA
AGCGGGCGGG CGTTTGCCGA GGTGTTGCGC CAGCTTTTGG GCTGA
|
|---|
| Protein sequence | MSAYFAERAL LPTGWASHVR IEVARDGRVA SIEPGASAEG AERLAGPLLP GMPNLHSHAF
QRAMAGLAEV AGNPNDSFWT WRDLMYRLVG QISPEQLQVI ARQLYIEMLK AGYTSVAEFH
YVHHDQAGKP YADPAELSRR ISAAAADSGI GLTLLPVLYS HAGFGGQAPN DGQRRFINST
GQYLQLQAQL APLLAAQPAQ QLGLCFHSLR AVTPGQIAEV LAASDRQCPV HIHIAEQQKE
VDDCLAWSGL RPLQWLYEHV DVDRRWCLVH ATHAEPDEVT AMARSGAVAG LCLTTEANLG
DGIFPAVDFL AQGGRMGIGS DSHVSLSVVE ELRWLEYGQR LRDQRRNRLY RGDQPMVGRT
LYDAALAGGA QALGQAVGEL AVGKRADWLV LDGQDPYIAM AEGDAILNRW LFAGGDRQVR
DVMVNGHWVV RQGRHAQEEE SGRAFAEVLR QLLG
|
|---|
| |