| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4906 |
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| Symbol | |
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| ID | 5193301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5505424 |
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| End bp | 5506956 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589391 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_001270210 |
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| Protein GI | 148550108 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.685103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAC TCACCCTCAA GCCTGGCACC CTGACCCTGG CCCAGCTGCG CGCGATCCAT
GCCGCGCCCG TGCGCCTGCA ACTGGATGCC AGTGCCGCGC CGGCCATCGA CGCCAGCGTC
GCCTGTGTCG AGCAGATCAT TGCCGAAGAC CGTACTGCCT ACGGCATCAA CACGGGTTTC
GGCCTGCTGG CCTCGACCCG CATCGCCAGC CATGACCTGG AGAACCTGCA GCGTTCGCTG
GTGCTGTCCC ACGCCGCCGG TATCGGCGCG CCGCTGGATG ACGACCTGGT GCGGTTGATC
ATGGTACTGA AGATCAACAG CCTCAGCCGT GGTTTCTCCG GCATCCGCCG CAAAGTCATC
GACGCGCTGA TTGCCCTGGT CAACGCCGAA GTCTACCCGC ACATCCCGCT GAAAGGCTCG
GTCGGCGCAT CCGGTGACCT TGCGCCGCTT GCGCATATGT CGCTGGTGCT GCTGGGTGAA
GGCAAGGCAC GCTACAAGGG CCAGTGGCTG CCGGCCACCG AGGCCTTGGC GATTGCCGGC
CTCGAGCCAC TGACCCTGGC CGCCAAAGAG GGCCTGGCCC TGCTCAACGG TACCCAGGCC
TCCACCGCCT ATGCCTTGCG TGGCCTGTTC CAGGGCGAAG ACCTGTATGC CGCTGCCATC
GCCTGCGGTG GCCTGAGCGT CGAAGCTGCG CTGGGCTCGC GTTCGCCGTT CGATGCGCGT
ATCCACGAAG TGCGTGGCCA GCGTGGCCAG ATCGACACCG CTGCCTGCTT CCGTGACCTG
CTGGGCGACT CCAGCGAAGT GTCGCTGTCG CACAAGAACT GCGACAAGGT CCAAGACCCG
TACTCGCTGC GCTGCCAGCC GCAGGTCATG GGTGCCTGCC TGACCCAGCT GCGCCAGGCC
GCCGAGGTAC TGGGCATCGA AGCCAACGCC GTGTCGGACA ACCCGCTGGT GTTCGCTGCC
GAAGGTGATG TGATCTCCGG CGGCAACTTC CACGCCGAAC CGGTGGCCAT GGCCGCCGAC
AACCTGGCCC TGGCCATCGC CGAAATCGGT TCGCTCAGCG AGCGCCGCAT CTCGCTGATG
ATGGACAAGC ACATGTCCCA ATTGCCGCCG TTCCTGGTGG AAAACGGTGG GGTCAACTCT
GGCTTCATGA TCGCCCAGGT CACCGCTGCC GCCCTGGCCA GCGAGAACAA GGCTTTGTCG
CACCCGCACA GTGTCGACAG CCTGCCAACT TCGGCCAACC AGGAAGACCA CGTGTCGATG
GCCCCGGCTG CCGGCAAGCG CCTGTGGGAA ATGGCCGAAA ACACCCGTGG CGTGCTGGCC
ATCGAATGGC TGGGCGCGTG CCAGGGCCTG GACCTGCGCA AAGGCCTGAA GACTTCGGCC
AAGCTGGAGC AAGCGCGCCA GGCGCTGCGC AGCGAGGTGC CGCATTACGA CCGTGACCGT
TTCTTCGCGC CGGATATCGA AAAGGCCGTG GACCTGTTGG CCAAGGGTAG TCTGACCGGC
TTGCTGCCGG CGGGTGTGCT GCCAAGCCTG TAA
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| Protein sequence | MTELTLKPGT LTLAQLRAIH AAPVRLQLDA SAAPAIDASV ACVEQIIAED RTAYGINTGF
GLLASTRIAS HDLENLQRSL VLSHAAGIGA PLDDDLVRLI MVLKINSLSR GFSGIRRKVI
DALIALVNAE VYPHIPLKGS VGASGDLAPL AHMSLVLLGE GKARYKGQWL PATEALAIAG
LEPLTLAAKE GLALLNGTQA STAYALRGLF QGEDLYAAAI ACGGLSVEAA LGSRSPFDAR
IHEVRGQRGQ IDTAACFRDL LGDSSEVSLS HKNCDKVQDP YSLRCQPQVM GACLTQLRQA
AEVLGIEANA VSDNPLVFAA EGDVISGGNF HAEPVAMAAD NLALAIAEIG SLSERRISLM
MDKHMSQLPP FLVENGGVNS GFMIAQVTAA ALASENKALS HPHSVDSLPT SANQEDHVSM
APAAGKRLWE MAENTRGVLA IEWLGACQGL DLRKGLKTSA KLEQARQALR SEVPHYDRDR
FFAPDIEKAV DLLAKGSLTG LLPAGVLPSL
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