Gene Pput_4903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4903 
Symbol 
ID5192690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5501828 
End bp5502631 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID640589388 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001270207 
Protein GI148550105 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID[TIGR02017] N-formylglutamate amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG TATTGAGTTT TCACCAAGGT CGCCTGCCGC TGCTGATCAG CATGCCGCAC 
GCTGGCTTGC GTCTGACCGA CGCCGTGCGC GACGGCCTGG TCGACCAGGC GCAAAGCTTG
CCGGACACCG ACTGGCACAT CCCGCAGTTG TACGACTTTG CCCGTGACTT GGGTGCCAGC
GTGGTAGCCG CAGAGTACTC ACGCTTCGTC ATCGACCTGA ACCGTCCGGA CGACGACAAG
CCGCTGTACG CCGGCGCCAC CACGGGCTTG TACCCGGCGA CCTTGTTCGG CGGCGAACCC
CTCTTCAAAG ACGGGCTGGC GCCGTCTGGC GAAGAGCGCA AACGCTATCT GGAGCAAATC
TGGCGCCCTT ATCACGCGAC CATTCGTCGT GAACTGGACC GCTTGCGTGA GCAGTTTGGC
TATGCGCTGC TGTGGGATGC CCATTCGATC CGTTCGCTGA TCCCGCACCT GTTCGACGGC
AAGCTACCGG ACTTCAACCT GGGTACTTTC AACGGCGCCA GTTGCGATCC GGCACTGGCT
GAGCGGCTGG AGGGTGTGTG CGCCGAGGTG CAAGGTTACA GCCATGTGCT TAATGGTCGG
TTCAAAGGCG GTCACATCAC CCGGCATTAT GGCGACCCGG CCAACCATAT CCATGCTGTG
CAACTGGAGC TGGCGCAAAG CACCTATATG GAGGAAGTCG AGCCGTTTGC CTACCGGGAA
GACTTGGCGC AACCGACGCA AGCGGTCTTG AGGCAGCTTC TGCAAGCGCT GCTGGCCTGG
GGCGACGCGC GTTACAAGCG TTGA
 
Protein sequence
MDKVLSFHQG RLPLLISMPH AGLRLTDAVR DGLVDQAQSL PDTDWHIPQL YDFARDLGAS 
VVAAEYSRFV IDLNRPDDDK PLYAGATTGL YPATLFGGEP LFKDGLAPSG EERKRYLEQI
WRPYHATIRR ELDRLREQFG YALLWDAHSI RSLIPHLFDG KLPDFNLGTF NGASCDPALA
ERLEGVCAEV QGYSHVLNGR FKGGHITRHY GDPANHIHAV QLELAQSTYM EEVEPFAYRE
DLAQPTQAVL RQLLQALLAW GDARYKR