| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4897 |
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| Symbol | |
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| ID | 5192561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5493504 |
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| End bp | 5494466 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589382 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001270201 |
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| Protein GI | 148550099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.691189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAAC ACAAGAAAGC CCAGTGGCCT TGGCATGGGT TGACTGCCCT GGTCCTGGTA
GGCCTGGCGC TCAGCCTTTA CATGGCCACC TCGATGATTT CCTACGAGTG GCGCTGGAAC
CGCGTACCGC AGTACTTCGC CTACAAGGCC GAGGAAACAC AACGCGCTGC CGGCTACGGC
ACTGTGCAGG AAATCGTCAT CTCCGGTGAC AACGCTCGCG TCACGCTGAA GGACGAAAGT
GGTGCCGAGC AAGTGCTCGA TGTGGCCAAG GACAGCCTGC AACTGAGCCG CGGCGACGAT
GTTGCCGAAG GCGACCAGAT TGGGGTAACC CGCCATTGGG CCGCTGGCCC GCTGGCATGG
GGCCTGTGGA CCACCTTGTG GATCTCGGTG GTGTCCGGGG CGCTGGGCCT GGTGATCGGC
CTGTTCGCCG GATTGTGCCG GTTGTCGAAC AACCCGACCC TGCGCGACCT GTCGACCGTG
TATGTCGAGC TGGTGCGCGG CACGCCGCTG CTGGTGCAGA TCTTCATCTT CTACTTCTTC
ATCGGCACCG TGCTCAACCT GTCCCGCGAG TTTGCCGGGG TAGCGGCGCT GGCATTGTTT
ACTGGTGCTT ACGTGGCCGA AATCGTCCGT GCAGGCGTGC AGTCGATCGC CAAGGGCCAG
AACGAGGCTG CGCGGTCGCT GGGCCTGAAC GCTGGCCAGT CGATGCGCCA TGTGATCTTG
CCGCAGGCGT TCAAGCGCGT GCTTCCGCCC CTGGCCGGCC AGTTCATCAG CCTGGTCAAG
GACACCTCGC TGGTGTCGGT GATCGCCATC ACCGAACTGA CCAAGAGTGG CCGTGAGGCC
ATCACCACCT CGTTCTCTAC CTTCGAGATC TGGTTCTGCG TGGCAGGCCT GTACCTGCTG
ATCAACCTGC CGCTGTCGCA CATTGCCAGC CGGCTCGAGC GGAGGCTTGC GCAAAGTGAT
TGA
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| Protein sequence | MIKHKKAQWP WHGLTALVLV GLALSLYMAT SMISYEWRWN RVPQYFAYKA EETQRAAGYG
TVQEIVISGD NARVTLKDES GAEQVLDVAK DSLQLSRGDD VAEGDQIGVT RHWAAGPLAW
GLWTTLWISV VSGALGLVIG LFAGLCRLSN NPTLRDLSTV YVELVRGTPL LVQIFIFYFF
IGTVLNLSRE FAGVAALALF TGAYVAEIVR AGVQSIAKGQ NEAARSLGLN AGQSMRHVIL
PQAFKRVLPP LAGQFISLVK DTSLVSVIAI TELTKSGREA ITTSFSTFEI WFCVAGLYLL
INLPLSHIAS RLERRLAQSD
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