| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4893 |
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| Symbol | |
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| ID | 5195329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5487263 |
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| End bp | 5487970 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589378 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001270197 |
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| Protein GI | 148550095 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.37927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGC TGCTTCTTGA AGAGGCCGAC TTCGTCTCGG CCAACCGTGT CGTTCTTGCT
GATCGGCGCT TCACCCATAT GCAGGAAATC CACCGCGTGG CAGTGGGCGA CAACCTGCGC
GTGGGCCGTA TCAATGGCCT GATGGGCAAG GCCACGGTGC TGCGCCTGGA AAAGCACGAA
GCCGAACTTG AAGTGGCCTT CGACCAGCAG CCACCGGCCA AGCTGCCGCT GACCCTGGTG
CTGGCGGTGC CGCGCCCCAA AATGCTGCGA CGGCTGTTCC AGACCGTGGC CACGCTGGGC
GTGCCGCGGC TGATCCTGCT GAACAGCTAC AAAGTCGAGA AAAGCTTCTG GCAAACACCT
TTTCTGCAGC CCGAGAGCAT TCGCGAAAAC CTGATCCTGG GCCTGGAACA GGCACGCGAC
ACCGTGCTGC CCGAGGTGAT CATTGAAAAA CGCTTCAAGC CTTTTGTCGA AGACCGCCTG
CCCACCATCG CCGCCGGCAC CCTGGGCCTG GTCGGCCATC CCGGCCCCTA CCCAGCCTGC
CCGCGCGCCG TAGAACAAAC CGTTACCCTG GCCATTGGCC CCGAGGGTGG CTGGATCCCC
TACGAGATCG ACCTGCTGGG CAAGGCAGGC CTGGCGCCGG TACAGCTGGG TGATCGCATC
TTGCGGGTGG AGACCGCCGT TACTGCGCTG CTTTCGCGTA TTTTCTGA
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| Protein sequence | MNLLLLEEAD FVSANRVVLA DRRFTHMQEI HRVAVGDNLR VGRINGLMGK ATVLRLEKHE
AELEVAFDQQ PPAKLPLTLV LAVPRPKMLR RLFQTVATLG VPRLILLNSY KVEKSFWQTP
FLQPESIREN LILGLEQARD TVLPEVIIEK RFKPFVEDRL PTIAAGTLGL VGHPGPYPAC
PRAVEQTVTL AIGPEGGWIP YEIDLLGKAG LAPVQLGDRI LRVETAVTAL LSRIF
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