| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4892 |
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| Symbol | |
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| ID | 5195328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5486478 |
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| End bp | 5487266 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640589377 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001270196 |
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| Protein GI | 148550094 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.418116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA ATCCGGAACA CGACCAGCCG ATGCCGCTGG TTTCGCACCT GACCGAACTG
CGCACCCGCC TGCTGCGCTG TGTTGCCGTC ATTTTCCTGA TCTTTGCCGG GCTGTTCTCC
TTCGCCCAGC AGATCTACAC ACTGGTTTCC GCGCCGCTGC GCGAGCACTT GCCGGCCAAC
GCAACGATGA TCGCCACCGA TGTGGCCTCG CCGTTCCTCA CGCCGTTCAA GCTGACCATG
ATCGTCTCGC TGTTCCTGGC CATCCCGTTC ATCCTTCAGC AGATCTGGGG TTTTATCGCG
CCAGGGCTGT ACCGCCATGA AAAGCGCATC GCCATTCCAC TGTTGGTGTC GAGCATCTTC
CTGTTCTATG CCGGCATGGC CTTCGCCTAC TTCCTTGTAT TCCCGCTGAT CTTCGGTTTC
TTCGCCAGCG CCACGCCAGA AGGCGTTTCG ATGATGACCG ACATCGCAAG CTACCTCGAC
TTCGTGATGA CGCTGTTCTT CGCCTTCGGC GTGGCCTTCG AAATCCCGGT GGCGGTGGTG
CTGCTGGTGT GGATCGGCGT GGTCGACGTG AAGTACCTGA AGAAAGTACG CCCTTATGTG
ATCATCGGCT GCTTCGTGGT CGGCATGGTC CTCACCCCAC CGGACATCTT CTCCCAGACC
CTGCTGGCCG TGCCCATGTG GCTGCTGTTC GAGATCGGCG TGCTGTGCGG CAGCCTGATC
CGAAAGCGCA GCGCCCACGA CGAAACCGCC GATGACCATA ACGACCAGCC ACCAGCGACC
CAACCGTGA
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| Protein sequence | MSENPEHDQP MPLVSHLTEL RTRLLRCVAV IFLIFAGLFS FAQQIYTLVS APLREHLPAN
ATMIATDVAS PFLTPFKLTM IVSLFLAIPF ILQQIWGFIA PGLYRHEKRI AIPLLVSSIF
LFYAGMAFAY FLVFPLIFGF FASATPEGVS MMTDIASYLD FVMTLFFAFG VAFEIPVAVV
LLVWIGVVDV KYLKKVRPYV IIGCFVVGMV LTPPDIFSQT LLAVPMWLLF EIGVLCGSLI
RKRSAHDETA DDHNDQPPAT QP
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