Gene Pput_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4888 
SymbolhisI 
ID5190894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5485073 
End bp5485465 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID640589373 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001270192 
Protein GI148550090 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.482144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT GGCTGGACGA GATCAAGTGG AACAGCGATG GCCTGGTACC GGCGATCGCC 
CAGGACCACA AGACCGGACG CGTGCTGATG ATGGCCTGGA TGAACCGTGA ATCGCTGGCC
CTGACCGCCG CCGAGCAGCG TGCCATCTAC TGGTCGCGTT CGCGTGGCAA GCTGTGGCGT
AAAGGCGAGG AGTCCGGGCA TGTGCAAAAA CTGCATGAGT TGCGCCTGGA CTGTGACGCC
GACGTGATCA TCCTGATGGT CGAGCAACTG GGCCATATCG CCTGCCATAC CGGTCGTGAA
AGCTGCTTCT ACCGCGTCTA TGAAGACGGC CAGTGGAAAA TCGTCGACCC GGTCCTGAAG
GACCCGGATG CCATCTACAG CGCAGGACAT TGA
 
Protein sequence
MKDWLDEIKW NSDGLVPAIA QDHKTGRVLM MAWMNRESLA LTAAEQRAIY WSRSRGKLWR 
KGEESGHVQK LHELRLDCDA DVIILMVEQL GHIACHTGRE SCFYRVYEDG QWKIVDPVLK
DPDAIYSAGH