Gene Pput_4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4886 
Symbol 
ID5190310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5482758 
End bp5483381 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID640589371 
Producthypothetical protein 
Protein accessionYP_001270190 
Protein GI148550088 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.8199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGG CCGGGCTGCT CGCCAGCGTC GAACATGGCC TGAACCGCGT CCTGCGCCTG 
GACAGCACGG CCCTGCCGCG GCTGGCCGCG CTGGAAGGCA AAGTCATCGA GATCGACTGC
CGCCAACCGG CCCTGCAGGT GTTTATCCTG CCCGATGAAG AAGGCCTGAT GCTCGCCGCC
CATTGGGAGG GCGAGGTCGA CTGCCGCCTG CGCGCCCCCG CCGGTAGCCT GGCGCAACTG
GCCTTGGTCA AGGACAAGAC CGCTGTACTG CACAGCCCGC AGGTCGAGCT GCACGGCGAC
AGCGCCGTAC TGCTCGACCT GTTCGGTGTG CTGCAGGACC TGGAGCTGGA CTGGGAGCAC
GAGCTGCAAC GCTGGCTTGG CCCGGTCGCC ACGGCAATGC TGGCCGGCCA TATCCGCCTG
CGCGCTCGCT GGACTCGCCA AGGCCTGGCA CGTTTCAGCC AGAACCTGTC CGAATACCTG
GCCGAAGAAT CCCGTACCCT GGTCGGCAAG CGCGAAGCCG AAGCCGCCTT CAGCGAGCTC
GATGCCTTGA AGCTTGATAC AGAACGCCTC GAAGCGCGCC TCAAGCGCCT CTCCCGATCC
CTTGATACCA GCGATAACGC ATGA
 
Protein sequence
MLLAGLLASV EHGLNRVLRL DSTALPRLAA LEGKVIEIDC RQPALQVFIL PDEEGLMLAA 
HWEGEVDCRL RAPAGSLAQL ALVKDKTAVL HSPQVELHGD SAVLLDLFGV LQDLELDWEH
ELQRWLGPVA TAMLAGHIRL RARWTRQGLA RFSQNLSEYL AEESRTLVGK REAEAAFSEL
DALKLDTERL EARLKRLSRS LDTSDNA