Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4882 |
Symbol | |
ID | 5190754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5476210 |
End bp | 5476629 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640589367 |
Product | poly(hydroxyalkanoate) granule-associated protein |
Protein accession | YP_001270186 |
Protein GI | 148550084 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01837] poly(hydroxyalkanoate) granule-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.780933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG TGATTGCGAA GAAAAAAGAC GAAGCCCTGG ACACGCTTGG CGAGGTGCGC GGCTATGCGC GCAAGATCTG GCTGGCCGGT ATCGGCGCCT ACGCCCGCGT CGGTCAGGAA GGCGCTGACT ACTTCAAAGA GCTGGTCAGG GCGGGTGAAG GTGTCGAGAA GCGCGGCAAG AAGCGCATCG ATAAAGAACT CGATGCCGCC AACCATCAGC TCGACGAAGT CGGTGAAGAA GTGAGCCGCG TACGCGGCAA GGTAGAAATT CAACTCGACA AGATCGAAAA AGCTTTCGAC GCACGGGTCG GTCGCGCCTT GAATCGCCTG GGTATTCCGT CTAAACATGA CGTTGAGGCG TTGTCGATCA AGCTTGAACA GTTGCATGAG CTGCTTGAGC GCGTCGCGCA CAAACCATAA
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Protein sequence | MAKVIAKKKD EALDTLGEVR GYARKIWLAG IGAYARVGQE GADYFKELVR AGEGVEKRGK KRIDKELDAA NHQLDEVGEE VSRVRGKVEI QLDKIEKAFD ARVGRALNRL GIPSKHDVEA LSIKLEQLHE LLERVAHKP
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