| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4880 |
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| Symbol | |
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| ID | 5194992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5474688 |
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| End bp | 5475302 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589365 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001270184 |
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| Protein GI | 148550082 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCC GCGACCGTAT CCTTGAATGC GCCCTGCAGT TGTTCAACCA GCAGGGCGAA
CCCAACGTAT CCACCCTGGA AATTGCCAAC GAACTCGGCA TCAGCCCAGG CAACCTGTAC
TACCACTTCC ATGGCAAGGA GCCCTTGGTA CTGGGCTTGT TCGAGCGTTT TGAAGAAGCG
TTGATGCCGT TGCTGGACCC GCCGCTGGAG GTGCGCCTGG ACGCAGAGGA CTACTGGCTG
TTTCTGCACT TGATCGTCGA GCGCATGGCT CAGTACCGCT TCCTGTTCCA GGATCTGTCC
AACCTGACCG GGCGCCTGCC CAAGCTCGCC CGAGGCATGC GCAGCCTGAT CAATGCAATC
AAACGCACGC TGGCGGCGCT GTTGGCCAGC CTGAAGCGCC AGGGGCTGGT GGAGAGTGAT
ACCCAGGCGC TGGGGCAACT GGTTGAGCAG ATCACACTGA CGCTGATGTT CTCGCTGGAT
TATCAGCGTG TGCTGGGGCG CGAGGGGGAT GTGGGGATCG TGGTGTATCA GGTGATGATG
CTGGTGGCGC CGCATCTGCA GGCCCAGGCC CGGGCGGCGG CGGAGCAGCT GGCAGTGAAG
TACCTGGAGG GGTAG
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| Protein sequence | MKTRDRILEC ALQLFNQQGE PNVSTLEIAN ELGISPGNLY YHFHGKEPLV LGLFERFEEA
LMPLLDPPLE VRLDAEDYWL FLHLIVERMA QYRFLFQDLS NLTGRLPKLA RGMRSLINAI
KRTLAALLAS LKRQGLVESD TQALGQLVEQ ITLTLMFSLD YQRVLGREGD VGIVVYQVMM
LVAPHLQAQA RAAAEQLAVK YLEG
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