| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4878 |
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| Symbol | |
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| ID | 5191096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5472026 |
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| End bp | 5472943 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589363 |
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| Product | poly(3-hydroxyalkanoate) depolymerase |
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| Protein accession | YP_001270182 |
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| Protein GI | 148550080 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR02240] poly(3-hydroxyalkanoate) depolymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.636657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTTACA GCGCCGTGGC GGCCTGCGGG GCGCCACGGT GTTTACTTCA CCCAAGAGTC
ACGTGCATGC CGCAACCCTA TATTTTCAGG ACCGTCGAGC TGGACCACCA GTCCATCCGC
ACCGCTGTTC GCCCTGGCAA ACCGCACCTG ACGCCGTTGC TGATCTTCAA CGGCATCGGC
GCCAACCTCG AGCTGGTGTT CCCGTTCATC GATGCACTTG ACCCGGACCT GGAAGTCATC
GCCTTCGATG TGCCTGGGGT CGGCGGCTCG TCCACACCAC GCCACCCGTA TCGCTTCCCT
GGGCTGGCCA AGCTGACCGC ACGCATGCTC GACTACCTCG ACTACGGCCA GGTCAACGTC
ATCGGCGTGT CCTGGGGCGG CGCCCTGGCC CAGCAGTTTG CTCACGATTA CCCCGAGCGC
TGCAAGAAAC TGGTGCTGGC CGCCACCGCT GCCGGTGCGG TAATGGTGCC AGGCAAGCCC
AAGGTGCTGT GGATGATGGC CAGCCCCCGG CGTTACGTGC AGCCGTCGCA TGTCATCCGC
ATTGCACCGA TGATCTATGG CGGCGGCTTC CGACGTGACC CCGACCTGGC CATGCACCAT
GCTGCCAAAG TGCGCTCCGG CGGCAAGCTG GGCTACTACT GGCAGCTGTT CGCAGGGCTC
GGCTGGACCA GCATCCACTG GCTGCACAAG ATCCAGCAGC CCACCCTGGT ACTGGCCGGT
GACGACGACC CGTTGATCCC GCTGATCAAC ATGCGCCTGC TGGCCTGGCG GATTCCCAAT
GCCCAGCTAC ACATTATCGA CGACGGCCAT CTGTTCCTGA TCACCCGTGC CGAAGCCGTC
GCCCCGATCA TCATGAAGTT CCTGCAGGAA GAACGTCAGC GTGCGGTCAT GCATCCCCGT
CCGGCCTCGG GGGGGTGA
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| Protein sequence | MSYSAVAACG APRCLLHPRV TCMPQPYIFR TVELDHQSIR TAVRPGKPHL TPLLIFNGIG
ANLELVFPFI DALDPDLEVI AFDVPGVGGS STPRHPYRFP GLAKLTARML DYLDYGQVNV
IGVSWGGALA QQFAHDYPER CKKLVLAATA AGAVMVPGKP KVLWMMASPR RYVQPSHVIR
IAPMIYGGGF RRDPDLAMHH AAKVRSGGKL GYYWQLFAGL GWTSIHWLHK IQQPTLVLAG
DDDPLIPLIN MRLLAWRIPN AQLHIIDDGH LFLITRAEAV APIIMKFLQE ERQRAVMHPR
PASGG
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